Microarray Probes on PGSC0003DMT400002999
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12409_PI426222305 |
JHI_St_60k_v1 |
GTTTTGTTTACAGGTAGTGAAAACTCTACAAAGTCTATTGCCAATCCCCGCGAACCAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400002999
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400002999 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G23790.1 |
+1 |
6e-55 |
192 |
93/135 (69%) |
Protein of unknown function (DUF607) | chr2:10125692-10127455 REVERSE LENGTH=336 |
Transcript Sequence (1975 bp)
>PGSC0003DMT400002999 1975 pgsc_dm_v3.4
TGGCTTCTTTCTTCATCATCGTTGAACAATCCAAATCCTAAACCAAAATCTCCCATTTAT
TCAAATCTATTTTTTCTCTCTTTCTGAAACCTCTTATTATCAATGGCGTTCAAAAAAACT
CTAGCTCAGCGTCTTTCCAATGTATACAAAACCACCGGTTTTTCCATTTCTGCTTGTCGC
ATATCTTCATCATCCATGTCAGCCAGAAAGCTGGTCCCTCCTCATCCTGACGACAAAATC
GCTCCAGATCCCGGAGATAATGGAATTTTCCGCCGATTCATCCAGCGGCGACTCATTAAC
ACATATCCGGCGACTTCGCCGGAGCTCCGGTCACTACCTATCGGTGAAAGTCTCATCGAG
AAAATCCGTGAAATGGATGTCAACAGAAGCAGGATCAAACTCGATGGATTCCTGCCGCCG
CTAGAGATGCGGCCGGAACCGGAGCCGGAGATAACGACGGAGGGGAAATTGACGGTGGCT
GATGCGAAGAAGCTGTTAAAAATATCACAATTGGAGATGGTGAAATTGAGGCTAAAGCAA
ACTGAAAAGAATTGTATTTCGTACCCGGAATTTGTTCAGATCTGCTCTGGAATTAGTTCG
AACAATGATTTAGGCATGGAATTCGCGAAGATTCTAGATGATTCTGGAACTGTGCTTGTT
CTGGGAAACGTTGTGTTCCTCAGGCCTGATCAGGTTGGTTTTCTTTCACTTTTTTTCATT
CTTCTTTTATCAATTAATCTTTTCTCTATGCTTTTGACAGATACACATTAAGATAAATTG
CTATTCGTTGGTAATTAGCAGCATTAATATAGAACTTAGTTAAAAAAAAATTGCATTATC
GAAAACTGATAGTAGCATTTTCGTGTTTTTTCTCCAGACAGGAAAATGAAACAAAGTTAC
TCCCAGATCTCTAAAACGAGATGGTGATTTTTATAAAGGAGTGGACCAGTTCGGATCATT
TTCAAAGACCCAAAATTTTCTTCCTGAACACCTTCAAGACCTTTATGATAGTTCGAATAT
AGGGAACAGAGTCAAAAATACCTTTAAACCATGTGTAGTTGGTTAGGAGGAAAATGTCAC
AACTTAGGTTAGGAAAATGTCAATTTTAAACCTTTTTTCCTATTCCAAACTGATATATAT
ATATATATTATTTTATTTTAAGAAATACTATTTGTATACCACTATATATATGAGCGAAGT
CAGATGACGACTATTGTCAAGTGGAATGTTGGTTTTACCCAAACGTTTTGTTTACAGGTA
GTGAAAACTCTACAAAGTCTATTGCCAATCCCCGCGAACCAAAATGACCCACAAATGATA
AAGGAGCTCAACCAAATGGAAGAGGAAAAAACAGCAATTGACAGAAAAGCAGAGTCATTG
GTGCGTAGAGAATTATGGTGTGGGCTAGGCTACTTTGTCATTCAAACAGCAGCATTCATG
AGATTGACATTTTGGGAACTCTCCTGGGATGTCATGGAACCAATTTGCTTCTATGTTACA
TCATTTTACTGCATGGCTGGTTATACTTTCTTCCTAAGGACGGCGAAAGAGCCTTCTTTC
GAAGGATTTTTCCAGAGCCGGTTTGTTGCTAAGCAAAAACAACTCATGAAGGTTCGGAAT
TTTGATCTTGAGAGGTATAACGAGCTCAAAAGAGCTTGTTATCCTCAATCGTCGATGGCG
CATCCTGAAAAAACCTTAACGTTTAAATGAACATTTTGTTAGGTAGAAGAATTTAGTTTA
GGAATAGTTAAGAAGGGAGTGCAAACGAGTTAAAGAGACATCAATTAGTCTCTCTGTTTT
TTTCTTCCCTTTTTTTGGTTTAATTTTTAACTTTCAATGTAACGGTCAATGTATATGCAA
ATGAAGAGGAATTCCAAATATAAAAATGTGTTTTACCCCAAGTAGTATATGCTTCACTTT
GCACTTGCCTTCGTGGTGCTTAGTCAGATTTTCATTATCAAAATAATTAAATTAA
