Microarray Probes on PGSC0003DMT400002123
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42763_PI426222305 |
JHI_St_60k_v1 |
GCCTGCTTACTTGGTTTGTGCATGTTAGAACTCTTCTATTCTACTTTGTGCTTCTTCATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400002123
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400002123 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G25580.1 |
+3 |
6e-177 |
513 |
265/449 (59%) |
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:8997064-8999600 REVERSE LENGTH=449 |
Transcript Sequence (1786 bp)
>PGSC0003DMT400002123 1786 pgsc_dm_v3.4
TGAGGGTTTATTGGGAACAGCCTTTCTACTTCTGAAGTAGGGGTAGGGTCTGTGTACATT
TTACCTCCCCAGACCCCACTTTGTGTGACTATATTGGGTTGTTGTTGTTGAGAAAACGAG
TACAAAAGGTGATCCTGGTTATACCTTGCAGGCCATCATGGTTAGTTGACAGTAGGAGGA
TTGCAACAAAAATTAAGAGTGCATCAGGTGATCCTGCTACAGTGAATTGGAAGAGCAACC
CTACAAAAGCTTGCCCTAATTGCCAGTTTATCATTGACAATAATGACGTCAGCCATGACT
GGCCAGGATTGCCAAGAGGTGTAAAATTTGATCCAACTGATCAAGAGATTATTTGGCACT
TACTTGGAAAAGTTGAAGGTGGAGATCGGAATTCCCATCCTTTTATTGATGAGTTCATTC
CAACTGTTGATGAGGATGACGGAATCTGCTATACACATCCTCAAAATTTACCAGGTGTAA
AGCAGGATGGAAGTGTCTCACACTTCTTTCACCGAGCAATCAAGGCTTATAATACAGGAA
CGCGTAAGCGTAGGAAAATACATGGTGATAATTCTGGCGATGTCCGCTGGCATAAGACTG
GTCGCACAAAACCTGTTATCTTAGATGGTATCCAAAGAGGGTGTAAGAAGATTATGGTTC
TTTATATAAGCCCATCTAAGGGTGGGAAAGCCGAGAAGACAAATTGGGTGATGCACCAGT
ATCACCTAGGAACTGGGGAAGATGAAAGGGAAGGGGAATATGTTGTGTCTAAAGTATTTT
ATCAGCAGCAGCAAGTCAAGCAGGGTGAAAAAATTGAACAAGAATTCCCCGAGGACTCCG
AATGTATGGTTGCTAAAGTAGATCCACATACCCCAAAGTCTGTGACTCCTGAACCCCCTC
GCGGTGAGAGACTATCTTCAAGTATGGATGCAAGAGAGCAAATTGCTGCTTCTAGTCCCA
TTAATCAGTATCATGAGGTGGAGGATTACGTAGAAGATGACATGGGATCTCTTCCTGAAC
AGCCTGAGAATCAAGACCAAAACATTGAGAATCAAATCGATGAAACTGGGACAAAAGTTG
AGACCGAGACTGGTGATGATCCGAAATGGTGGGACAGCGAGTCACAATATTTGCTGGATT
CTCAACAACTCGTAGAAGGGCTATCCTTATGTGATGATCTTCTTGCGAGCCAGTCTCCAA
ATAGGGATGGAAATGAAAATGACCAAGTGCATAAATGTAAACCTAGTCTTGCTGATTATG
CACGTTTAGGACCCGAGGATCTGAAGAAGGATTTGGAGGAGTGCCAACAATTTGTTGCTG
ATCCAGCCAACATAGAGATTGGCACTCCACCTGATTTCCGGCTTAGTCAACTTGAGTTTG
GATCACAGGACAGTTACATTGCATGGGGCGGAAACAAGTATGGTTTTGATTCTGCAGAGC
AAAATGGTTGAGATCATAGCTCATCGAATGCTGTCAAGATTGCTAATCCTTAGGTATCAA
ATTTTGTCAAGCTTGTGGTAAAACTATGTCTACTGCAAGTTAACAGAAACTATTACTTGA
TGCAACTTCCTGTTTTGTTACCAATGCGCGGTATTGCCTCAGAAGGCACGTTAAGTCTTT
TTGTGCTAGAACGTTCGTTGAACGATCTGGATTCCTTGCTTAGTTAACCTGTACATAAGG
TTTCATTATTACTACTATTTCCTATGCAAGTTTACAACTTTTTGCCTGCTTACTTGGTTT
GTGCATGTTAGAACTCTTCTATTCTACTTTGTGCTTCTTCATCTAG
