Microarray Probes on PGSC0003DMT400002087
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43242_PI426222305 |
JHI_St_60k_v1 |
CAAACATCTAATTCAGGATTGGAATTGGACTTGAGATTAGGGCTATAATGTATAGTAGGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400002087
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400002087 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G35280.1 |
+1 |
6e-68 |
228 |
140/333 (42%) |
C2H2-like zinc finger protein | chr4:16787429-16788283 REVERSE LENGTH=284 |
Transcript Sequence (2300 bp)
>PGSC0003DMT400002087 2300 pgsc_dm_v3.4
GCTTATTTTGATTGACTTTATAATCTGTGATAAGGTTGTTAAAGTGGCAGATTTTGGTGT
TGCTCGTTTCCAAAATAATGGAGGTGTCATGACAGCTGAGACTGGAACATATAGATGGAT
GGCCCCTGAGATCATCAATCATCAGCCCTACGACCAGAAAGCAGATGTGTTTAGTTTTGC
CATTGTTCTTTGGGAGCTTTTAACAGCAAAGGTTCCATATGATACCATGACTCCACTACA
AGCTGCACTAGGAGTGAGACAGGGCCTCCGACCCGAGCTTCCAGAAAATGCACACCCGAG
GCTGTTAGACTTGATGCAGAGATGTTGGGTGGACATCCCCAGTGATAGACCCAGTTTCTC
TGAGATAAAAGTTGAGCTTGAACTACTCTTACATGAAATTGAGGATACCATAGAGGCATC
AAAAGGGAGCTGAGTGATGCGCGCTTGCATATATTGGACTAACGACACTTCTTACCAGTA
ACAATAGAAGATTTTCTTTTACTTACGCCATATATACGGGGACCTTAACTTTTTTGGTGA
GATATCTATGCCACAAGCATAAGGTAGAGTCCACTGCTTTTGGCCATTTTGGAGTTAAGA
GTAAAGGTGATTCATTTTGTGATAACACGTTATGCATCACTAAGTACCACTAACATCGTT
TTTGTAAAATCTTTCTACCTATTTTTCCCATTTGAGAAGTTTGGTCGTGTACTAGCATTT
TCTGTTTTACGAGTTTGGTTCAGATCAAAATAATTAATTACTATAATATTTCCTAACATA
ATTTAATTTTATTAATTTTATTTTTTGGGCATGTTGGGTTGGGGAGATAATGATGAGTTG
CCTCATTAACTGCTGTTTCCCTCGATCCCTCTTTCGTACAGCACCAATATAACCGCTGTT
TACCTCTATCCCCTCATTCTTACAGCATCAGTTAAACCGTTCTCTTCTTTTATTAACTGT
GTACATACATGAGGTAAACTAGTTCATTCTAATCCACCTTTTCAAAATATGGACAACCAA
AACACTTACTGCACTACTACTACTACAAGTTTTCTTCAACCCCTTGTTCCACAAAGTCAA
GTAATTGGTGATTATCATCTTCTGGATCAAAGCCATCATCATGAAGACGAAGAGGCGGAA
ATGTCGAGAAGATTCACCATGGTTGACACAGATATCAGGTACAAACCTCGTCAAAATCCC
AGGAAGAAAAGAAGCAAGTTGTTAAGAATTAGTGATAATAATTCCCTTAGAATCAGTACA
AGTACTGCTAGTACTTCCGGTCTCATTACTACTAAGCCTAAATGTACCAAGAAACCACCA
GACCCTTATGCACCAAAAATTACTAGGCCTTGTACTGAATGTGGCAAGAAATTTTGGTCA
TGGAAAGCGCTCTTTGGTCACATGCGTTGTCATCCTGAACGCCAATGGCGCGGTATTAAC
CCTCCTCCCAATTTAGAACGACAAGTCCGTTCTTCATTTCCCCAACAATCCCACATTTCT
GTTTCAACATCAGACGAGGATCATGAAATAGCGGAGTGCTTATTGCTCTTGGCTAATGGA
CTCAATGATGACGTTCATCAATTGGTTATGGATGAAGGAGTTGAAGAAAAAGGTGTAAAT
GAACCAGGGATACCTTCTTATAACTGTTGTAAATTTGAGTGTTCAAGTTGCAAGAAAGTA
TTTGGTTCACACCAGGCATTAGGTGGACATAGGGCTACTCACAAGAATGTCAGGGGTTGT
TTTGCAAATACAAAAACTATTGAGGACTGTAGCGAGCAATTAGGATTGTTAGAAGATGGC
ACCACTATGTGCTCCTTAGAACAAGGGAGAGGAAGTGACAATGAAGATATTACAAGCAAT
GATAACAAAAGATTGATGGTGTTGGGGCATAAGTGTAGTATATGTTTGAAAGTTTTCTCA
AGTGGACAAGCTTTAGGAGGTCACAAAAGGTGTCATTGGGAAAAACTCGGATACGAAACA
ACAACAACAACAATAATAACAGACTCGGACTTAACACGAGCTGTCGTTGCCAATGTCAAT
CCAATGGAGCAAGAAAATAATATTGCTGATAATTTGGATCTTAATTTTCCTCCTGTTACA
ATCTCAAGATATGATCAACATAATTCTTCAGCTTCCCAAACATCTAATTCAGGATTGGAA
TTGGACTTGAGATTAGGGCTATAATGTATAGTAGGAATATGTAATAATGATATTAGTGTT
TCATCTATTGCCTAGGAATATAGGCTAAAGTTTCAATGATATTTATGTTGTATCATCATA
TATAGGAGTTTGACTAATTA
