Microarray Probes on PGSC0003DMT400002060
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43228_PI426222305 |
JHI_St_60k_v1 |
GGGGTGGGGGTCTAAACTTATTCTTACTTGAAAAATGACAGTTAACTGTCACATTGTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400002060
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400002060 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G52440.1 |
+2 |
8e-37 |
135 |
70/122 (57%) |
Dof-type zinc finger DNA-binding family protein | chr3:19435447-19436190 FORWARD LENGTH=247 |
Transcript Sequence (1036 bp)
>PGSC0003DMT400002060 1036 pgsc_dm_v3.4
TCCAAATCTAACTTCTTTCTAGTCTTCAAAGAGTATTACATATATATTTATTCACAAAAA
CATGTTACCGTACCATCCAAGGCCAATGATCATGATGGAAAGGACAAGAAAGTCCAATAT
TGAACAAGCACCAAATTGTCCTAGATGTGCATCTACCAACACAAAATTTTGTTACTACAA
CAACTATAGCTTGTCACAACCTAGGTATTTTTGCAAAGCTTGTCGTAGATATTGGACTAA
AGGTGGTTCTCTTCGAAATGTCCCCGTTGGTGGCGGTTGTCGGAAAAGTCGGCGTTCAAG
ATCTACACAAAAAGACGATAATACCCTTCAAACATCGAGTCCCGCCCTCGAAGGCGCTCC
CGGAGCTCATGACATTGATCTAGCCGATGTTTTCGCTAAGTATTTGAACCAAGGTACAAA
TAATGATCATGATGATAATATTATTATTCAAGAATCTCAAGATTATTCTTCTATTGGAGC
AAGCTTATCTAATTCTCCTTCATCAGATAGCTTGGTTAATAATCCAACTTCTTTTGAGAA
TGAAAGTTTGTTGGATAATTTCCAAGATTACCCTTGTGGTAATTTTCTTCAAGAGGAGCA
AGGGGGTCAAAATAATCAAGATTTTCTTGATTTTAACACTAGCTTTCTTGAAATGCAAGC
TATACTTGGACAAGAGGAGGATCAATTTGATCATTATAACACAAGTAATTTTGAGTGGCA
ACCAATGATGCAATTTCAAGATTTTGGATCAATTTTAGAACTAGATGATCATCAACTCAT
AAAGAATTCAACAACAAACTTAGCAAGTCATGACAATAACAACAACAACTATAGTTCATT
TGATCTATCCAACTATATATGAAATTTACTTAAGGTGCAAAGGGTATCTTCTTTATTTTT
TTTTATTTTTTTTTTGGTTTGGTGGGGGTGGGGGTCTAAACTTATTCTTACTTGAAAAAT
GACAGTTAACTGTCACATTGTTGTTTGAAAGAGACTTGTGAGAAATACAGGATGAATATA
ATAAAAAAAATACACA
