Microarray Probes on PGSC0003DMT400001663
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45361_PI426222305 |
JHI_St_60k_v1 |
ACAGTAGGCATGTCCCCTTGTAGTATCGAATAAACAATCTATAAGTAACAGTTATGGTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400001663
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400001663 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G20230.1 |
+2 |
1e-23 |
97 |
61/159 (38%) |
blue-copper-binding protein | chr5:6826626-6827408 FORWARD LENGTH=196 |
Transcript Sequence (1042 bp)
>PGSC0003DMT400001663 1042 pgsc_dm_v3.4
CGCAATTTAAGAGTTTAGACCAATTCAAAAATTCCTTCCCTTATATATACAGAACCATAT
TGTCTATCTAGTCATCTCATCCTACCCTAACAAACTACGTAGTAATCATCAATTTCCTCA
CTAGCGACTTCCAAAAAACGTCGAATTAAGAAATTAGTTACCAAAAACTTAAGATATGGA
CAAAATGTTGTGCATGATGGTCTTTGGTGTTTTAGCCGTTGCAAGTATGATGCAAGACGC
AACAGCCCAAACGGTGCATGTAGTTGGGGACACCATGGGTTGGATCATACCAAGCAATGG
CACGGCAGCTTATACAAATTGGGCTGCTGGGAAAACCTTCAGCGTTGGTGACACACTAGT
ATTCAATTTCACGACTGACCGACATGACGTGCTGCAAGTAGAAAAAACATCGTTCGATGG
TTGCAATTCACTGAATGCCATAGGGAATGCTATAATGACAGGACCAGCTAATATGACTCT
AAACTCTACTGGAGAACACTACTATATTTGCACTTTTGGTATGCACTGCCTAAATGGCCA
GAAATTAGCTATTACAGTTTCCAGCGGCACTGGTACTCCAGAAGCCAACCCGCCTAACCC
AAGCAATCCAACAACTCCTGTTGTGCGACAACCAGAAGCTTGTGCACCTACACCCTCTGC
TGCAGGACCTTCAAATTCTGTTCCAGGTGGTCGTGCTCCTCCTACGCCTTCGTCCTCAAC
GACCGTGTTGGCCAGTTTTGTACTCAGTCTGTCCACCATTGCCTTGGCCACTTTACTTTA
AATTGGGTAAATTAAGGAGGTGTTGAGCTTCCTAGTTTATACGTAATAATAATGTGATGA
ATTTTTTTTAATTATTGGATTGAGTTTTGTTTTGTGAGTGGCAGTAAAATTGTTGTATTG
TTTTTACGATCATCATCAGTGCAGATTATTTTGGTACAGTAGGCATGTCCCCTTGTAGTA
TCGAATAAACAATCTATAAGTAACAGTTATGGTGTATTTTATCATACCAATATTTGTTGA
TCCAATATAAATAATGATGGTG
