Microarray Probes on PGSC0003DMT400001613
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45376_PI426222305 |
JHI_St_60k_v1 |
GGCCACAGTTTTAACAGAAGAAGGAGTATTTGATGAGTGATTTTGTCAAAATTTCTCTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400001613
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400001613 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G47620.1 |
+2 |
3e-45 |
168 |
155/312 (50%) |
TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 | chr3:17559004-17560473 FORWARD LENGTH=489 |
Transcript Sequence (1782 bp)
>PGSC0003DMT400001613 1782 pgsc_dm_v3.4
ATTCATTCAAAGAGAGAGAAAGAAACATACACAGACCCACAAAGAATTAAATATAGTGTC
TGTCACTATTTTCTCATAAAAAGAACTTGGCCTGCCTAGTGAGAAAAAAAAAGAGAAAGA
AGGGGCTCATTTTAATTTTTTTTAAGAGCGAGTTTTTAGTCATTACTACTTTGTGAACAT
GGATGGAGGAGGTGATGATCATCTCCACCAACACCACCAACACCATCACCAACACAATCA
CCGCCCTATCGCGACTTTTCCGTTCCAATTACTTGAGAAAAAAGAAGACGAAGCTTGTTC
CAGTTCATCCAACGCTGCAGCTGCTTATACTACTTCTCTTGCCATTTCAAACACAGATAA
TACTCATACAAATCCTAATAATACACCTCGATCAACAACTTCAACTCTTCAAATCTCAGC
TTCTGGTGCCGATACATCTAAAAAGCCGCCCCCAAAGCGAACCTCCACCAAAGACCGCCA
TACTAAGGTTGATGGTCGTGGCAGACGTATCCGCATGCCTGCGCTTTGTGCAGCTAGGGT
TTTTCAGCTCACACGGGAACTCGGTCATAAATCCGATGGTGAAACCATAGAGTGGCTACT
TCAACAAGCGGAACCATCAGTAATCGCCGCTACAGGAACCGGTACAATTCCAGCAAACTT
CACGTCGCTTAATATTTCACTACGTAGCTCAGGCTCCAGCATGTCAGTACCTTCACAGCT
ACGATCTTCATATTTCAATCCGAATTTTTCGCTCTCACAACGACGAGGGCTATTTCCTCC
GGGAATTGGATTGTCGACTGATACTTCAGCTACTACGTTGTTGAATTTTCAGTCGGCGAA
TTTAAGCCCTAATATGCAGTTACAAACAAAGCCTGAATTGCGTGACAATTCAATCGATTT
AACGGAGTCGAGTCCGGCGGAGGATAATTTAAGTAGGAAACGAAGGTCAGATTTAGATTT
GGAGCAGCAGCAGCATCAACAACAACAGCAAATGGGAAGCTATTTGCTACAGTCGAGTAC
TGGTCCGATGCCAACAGGCCATTCTTCAATTCCGGCTAATTTTTGGATGGTGACGAATCC
GATTCCTAGTAACCAAGTGATGGGAGGCGATCCGATTTGGCCGTTTCAATCAGTAAGCAA
TTCTGGTGCAGCAGCTGCTTTGTATAGAGGCACAATGCCAAGTGGATTGCAATTTATGAA
TTTTCCCACTCCAGTTGCGCTTTTGCCTAGTCAGCAACTAGGCGGCGGCAGTAGCGGTGG
CGGCGGTAATAATGGATTGGGAGAAGGTCAATTAGGCATGTTTGCCGGACTAAATCCGTA
TAGAGGTGGTGGCGGTGTATCGGAATCTCAGGCGAGTGGGTCCCATTCGCATCACGGCGG
TGGCACGGATGATCGGCACGATACAACGAGCCATCATTCATAGCTATAGACTGCTGATTG
ATTGATCATCAAATTCATCCATTCTTTCCCAACTTGTGTTTTGTAAGTTTGGATGTTTAA
AGTTCCTTATATTTTTCTTTTTTGTTGTTAAATTTGTTCTGAACATTCTTTTTTCTTTCT
TCACCTTTTTTATCGTGTGATTAATTTGCCTTACGAGTTTGAAGAGGCCACAGTTTTAAC
AGAAGAAGGAGTATTTGATGAGTGATTTTGTCAAAATTTCTCTGAATTGTTTTTCCAATT
TTAGAGTCGTTTGCTATTCATCATCATTTGATTGTTCTTTTTTATCTTTCTTCTAAAGTT
ACATGTACAAACATTATTACAGTAAGTTAATTTGTTCTGGAT
