Microarray Probes on PGSC0003DMT400001571
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_17388_PI426222305 |
JHI_St_60k_v1 |
AGTATACATCCGCCAAATTAAACTAATCGCGTTGGGTCTATTGTACACCATATATATTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400001571
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400001571 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G53730.1 |
+3 |
6e-71 |
221 |
124/215 (58%) |
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr5:21808072-21808713 REVERSE LENGTH=213 |
Transcript Sequence (893 bp)
>PGSC0003DMT400001571 893 pgsc_dm_v3.4
TTCATTTCATTTCATTTCCTTAGCATTGTAAACTTGCCTTTCTTTATTTTCTTGCTTAGC
AGATGTCTCCAATTGATGTAAAATCCCCAAAACACTGTGAAGAAAAAGGCTTCAAAGTAG
AAAATCTATTCCCAAAAAAGAAGTTATTCTTTTGCTTCTCAACAATTTCCCTCTCTATTC
TCTCATTCATCTTTCTTCTTTACCTCACACTTCATCCTACAAAACCAAATTTCACATTAA
GAGAAGCTGATATTTATCAACTCAATCTCTCAGGTCCACGCCAACTGCTTAACTCGTCTA
TACAACTCACCCTCGTATCGAAAAATCCAAATAAGAAAGTTGGAATTTACTACGATGAAT
TGCAAGTGTTTGCTTCTTATAAAGGACAACAAATTACTCTTCATACTTCTCTTCCTCCAT
TTTATCAAGGCCATGAAGATAGTAATTTTTTATCGGCTTTGTTGATTGGGAATGGATTGC
CAGTGGATCCTTATTTTGGTTATGAGGTGCAACGTGACCAAAGTGTTGGAAAACTGATTA
TGAATTTGAAAGGAAGTGGTAGGTTGAGATGGAAAGTTGGAACTTGGGTTTCTGGGAAGT
ATAGGTTTAATGTTGATTGTGTTGCTATTATGCCTTTTGGATCTTCCTTGCCATCTGCTC
CGCTTAGTTTTAGACAAGGAGCGCAATGTTCTACCACTCTTTGAATTAAATATTACTAGA
AATAATTAATTAAAGCCCTTCCTCACATAGGGAGTATATTGTTCTTCTTTTAATTTCATA
TATATTTTGTATGATTATACTATTGTAAATTATCTTTTGATGAAAGGTACTTGAGTATAC
ATCCGCCAAATTAAACTAATCGCGTTGGGTCTATTGTACACCATATATATTTG
