Microarray Probes on PGSC0003DMT400000694
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_3228_PI426222305 |
JHI_St_60k_v1 |
GGAGGGTTGATGTTGTTGCAACGAGTTTGAGTTTAAATTTTATGCACGATGTAGATAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000694
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000694 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G61890.1 |
+3 |
2e-64 |
210 |
114/219 (52%) |
homeobox 12 | chr3:22914346-22915239 REVERSE LENGTH=235 |
Transcript Sequence (1359 bp)
>PGSC0003DMT400000694 1359 pgsc_dm_v3.4
GTTACAAGTTAAAGAATTCCCCACCAGAGCTGAACACCATAAAGATACCATTCTATCAAC
TGTCAACTACTGCCACAGAGATACATGAACATTCCAGTTCCAATCCACACACATAGATAT
ATCCCAAATCAAGAAATTTCACAAATAAGATGTTTGATGCAGGGGAATTTTCTCCAAGTT
CTTCAACAGCTGCTCTGTCTGCAGAGTGTTTCAGTAGTAGCAGCTGCTTCAGCAGTCTGT
CATCCTCAAAGAAGAAGAAGATTAACAATAACAACGCGAGGAGGTTCAGCGATGAACAGA
TAAAATCATTAGAAACGATGTTCGAAACAGAGACCAAACTTGAACCAAGAAAGAAGCTGC
AACTAGCCAGAGAACTCGGATTACAACCTCGACAAGTAGCAATTTGGTTTCAAAACAAGA
GAGCTCGATGGAAATCGAAGCAACTCGAAAGGGATTACAGTATACTTAAATCAAATTATG
ACAATCTTGCTTCCCAGTACGAATCTTTAAAGAAAGAAAAACAATCCTTGCTTATTCAGT
TGCAAAAACTGAATGATGTGATGCAGAAAGAAAGGGGGAAGTACTGTTGCAAGCAAGAAA
TCGAGTTAGACAACAGATGTGCTGCAATTAAGAAAAATGAAATGGAAGGGATGCCAAGCT
TGTCTTTTGACTTATCATCTCAGCATGGAACAAATGGTGTTATTTCAGATGATGACATTG
ACAGCAGTATAAAAGCTGATTATCTCGGGTTAGATGACGATGCAGTACATCATCTACTGA
AAATTGTTGAAGCAGGGGATAGTTCTTTAACTTCCCCTGAAAATTGGGGCAGTCTAAACG
ACGATGGTATCTTAAACCATCAGCCTAATAGTTCTAGTTATGATCACTGGTGGGATTTCT
GGTCTTGAATCAGAATTGTCGACAACATATACACATCTAAAACGTTGGCTTTAGAAATGA
TCAGATGCCAAATTGCTCGCGACTCTTGTACATTTGATCGAGCATGCTGGGCATCCTTTG
TTTTCACTTTCATAAGAGTTGAGTTTACCTCAGCCTTACAGTGCCTTTGTCTACTTGACA
AACTGTAATCTTGTATACTAGTACTAGTCCATGGTGATTTTAGTTTGTATGCCTTGAAAT
ATGCTACTTGTAATACGTAGTAATTATCAGATCAGAATAGCTGAGAAGTATAATTTCCAG
CAGCTCGTAATCAGAGATATAGTTTAAAAGAAAGTAACCACACAGAATAGAAGCTATTGG
AGGGTTGATGTTGTTGCAACGAGTTTGAGTTTAAATTTTATGCACGATGTAGATAATAAA
TAATCTGCTATTATAAGTTAAACTATAGTGTTTGTCGTG
