Microarray Probes on PGSC0003DMT400000593
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_3284_PI426222305 |
JHI_St_60k_v1 |
CACCCTATGGATGCTTCTTCCTACAACTTCTTCTAAATTTAGTGTCAGTTATAACCTTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000593
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000593 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G46330.1 |
+1 |
3e-21 |
83 |
42/63 (67%) |
arabinogalactan protein 16 | chr2:19018730-19019108 REVERSE LENGTH=73 |
Transcript Sequence (406 bp)
>PGSC0003DMT400000593 406 pgsc_dm_v3.4
TTGCAAGATAATTACATTTTTTTTCTCTCTTGAGTAAGAAAGGGTGGGGGGATATTAGTT
ATGGCTTTTGTAGTTTCATTGTTGTTGGCCATCTTTGCCATGGCTTTTTTCACTGTTCAA
GCTCAAGAATTTGCTCCTGCTCCTGCCCCTACTAGTGATGGAATATCTGTAGATCAAGGG
ATTGCATATGTGTTGATGCTGGTGGCTTTAGTTCTAACATATCTCATTCACCCTATGGAT
GCTTCTTCCTACAACTTCTTCTAAATTTAGTGTCAGTTATAACCTTTAAATTATGTTGCT
TTTTTGGGGAAATGGTTGTAATCATTCTTCATATGGATTTAATTGGTTAATCCATTCATG
TTTAATTTAATTTCTAGTAAATGGTAATATATTTAGTTGTCTTTTT
