Microarray Probes on PGSC0003DMT400000553
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2807_PI426222305 |
JHI_St_60k_v1 |
CTAGGAGGAGTATTTTCAGAAATAGTTGTTAGCGTATGTATTGACAACTGATCTATGTAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000553
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000553 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G01480.1 |
+3 |
0.0 |
628 |
315/482 (65%) |
1-amino-cyclopropane-1-carboxylate synthase 2 | chr1:175862-178051 FORWARD LENGTH=496 |
Transcript Sequence (1753 bp)
>PGSC0003DMT400000553 1753 pgsc_dm_v3.4
GAAACACATAATACTTTTAATACAATTAGTTATTTATTAAAAGTATTTGAAGTTAAGCAC
TTGTGAGTTGTGTGCATTTTGTTAATTTTCATCTTCTTAATTCTCTTCACTTTTAAACTC
ATTTAGAAACAAAAAAAATGGGATTTGAGATTGCAAAGACCAACTCAATCTTGTCAAAGC
TGGCTACTAGTGAAGAACATGGCGAAAACTCGCCATATTTTGATGGGTGGAAAGCATACG
ATAGCGATCCTTTCCACCCTCTAAAGAACCCAAATGGAGTTATCCAAATGGGACTTGCTG
AAAATCAGCTTTGTTTAGACTTGATAGAGGATTGGATTAAGAGAAACCCAAAAGCTTCAA
TTTGTTCCAATGAAGGAATCAAATCATTCAAGGCCATTGCCAACTTTCAAGATTATCATG
GCTTGCCTGAATTCAGAAGAGCGATTGCGAAATTTATGGAGAAAACAAGAGGAGGAAGAG
TTAGATTTGATCCAGAAAGAGTTGTTATGGCTGGTGGTGCCACTGGAGCTAATGAGACAA
TTATATTTTGTTTGGCTGATCCAGGCGATGCATTTTTAGTACCTTCACCATATTACCCAG
CATTTAACAGAGATCTAAGATGGAGAACTGGAGTACAACTTCTTCCAATTCACTGTGAGA
GCTCCAACAATTTCAAAATTACTTCAAAAGCAGTAAAAGAAGCATATGAAAATGCACAAA
AATCAAACATCAAAGTAAGAGGTTTGATTTTGACCAATCCATCAAATCCATTGGGTACCA
CTTTGGACAAAGACACACTGAAAAGTCTCTTGAGTTTCACCAACCAACACAACATCCACC
TTGTTTGCGACGAAATCTACGCAGCCACGGTCTTTGACACGCCTCAATTCGTCAGCATAG
CTGAAATCCTCGATGAAAAGGAAATGACTTATTGCAACAAAGATTTAGTTCACATCGTCT
ATAGTCTTTCAAAAGACATGGGGTTACCAGGATTTAGAATCGGAATCGTATATTCTTTTA
ACGATGACGTCGTTAATTGCGCTAGAAAAATGTCGAGTTTCGGTTTAGTGTCAACTCAAA
CGCAATATTTTTTAGCCGCTATGCTATCGGACGAAAAATTCGTCGATAATTTTCTGACAG
AAAGTGCGATAAGGTTAGCTAAAAGACACAAACATTTTACCAATGGACTCGAAGAAGTGG
GAATTAAATGCTTGAAAAATAATGCGGGGCTTTTTTGTTGGATGGATTTGCGTCCGCTTT
TAAGGGAATCGACTTTCGATAGTGAAATGTCGTTATGGAGAGTTATTATAAACGACGTAA
AGCTCAACGTCTCGCCTGGATCATCATTTGAATGTCAAGAGCCAGGGTGGTTCCGAGTTT
GTTTTGCGAATATGGATGATGGAACGGTGGATATCGCGCTCGCGAGGATTCGGAGGTTTG
TACGTGTTGAGAAAAGTGGAGATGAATCGAGCGCGATGGAAAAGAAGCAACAATGGAAGA
AGAATAATTTAAGACTTAGTTTTTCGAAAAGAATGTATGATGAAAGTGTTTTGTCACCAC
TTTCCTCTCCTATTCCTGCCTCACCACTAGTTCGTTAGGACTTAATTAAAAGGGAAGAAT
TTAATTTATGTTTTTTTATATTTGAAAAAAATTTGTAAGAATAAGATTATAGAAGGAAAT
CTAGGAGGAGTATTTTCAGAAATAGTTGTTAGCGTATGTATTGACAACTGATCTATGTAC
TTTGACATCATAA
