Microarray Probes on PGSC0003DMT400000546
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_3075_PI426222305 |
JHI_St_60k_v1 |
CGCCTAGAATTTTAAGGTTGGGTTCATTTGAATTGAGTCAATCTTAACGCATTATAGCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000546
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000546 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G52660.2 |
+3 |
2e-87 |
277 |
174/310 (56%) |
Homeodomain-like superfamily protein | chr5:21359423-21362037 REVERSE LENGTH=331 |
Transcript Sequence (1686 bp)
>PGSC0003DMT400000546 1686 pgsc_dm_v3.4
TAAATTTTCATTTCATAAACGAAATAGAGCAGAGAGAACACTCAGAAAGCTGAAGTTTCT
GTTTCTATATTGATACATAACATATGGTGTCTGTATATCCAACACCGCCGGGTCAAAATT
TTCACTACATGGGGGATCCGATGAAAACGGGTCTTATGGGTTTGCATCCGGTACAATCGG
GTACTAGTATACATGGGAATTTGAATTTGGATTCGAATACAGGCTTGGGAGTGGTGGTGT
CCGATGATCACAGCAAGAAGACACGGAAGCCCTATACGATTACTAAGTCTAGAGAGAGCT
GGACTGAGCAGGAGCATGACAAGTTTCTTGAAGCTCTTCAATTGTTCGACCGTGATTGGA
AAAAGATTGAAGCATTTGTTGGGTCGAAGTCTGTTATCCAGATACGTAGCCATGCACAGA
AATATTTTCTGAAGGTCCAGAAGAGTGGAACTAGTGAACATGTACCTCCCCCACGCCCAA
AGAGAAAAGCTGCTCATCCTTATCCACAAAAAGCTCCTAAAAAGGTTATGTCCCAAGTTG
GCAGCATCCAATTTCAACCTCCTGGTGCTTTGCCTGAACCAGGATTTGGTATCGGGCCTG
ATCCTTTATCTGTATCTGGAAATACAATTAATTTTTCTCCCTGGACTTACGACAATGTGC
CTGCTATCAGCACGACACAGATGAGAAAAGATGATGCACAATTATCCAGTGGAGGAGTCA
TGCAAAATTGCAGCAGCAGCAGTAATGAGTACATCCCTAGGATTAATAAGACTAAAGAGA
GCAATGACCAAAAGGAGAGCCAGAAGCAAATGAAAGTTATGCCAGACTTTGCTCAAGTTT
ACAGCTTCATCGGCAGTGTCTTTGATCCAAGTACTAGGGACCACTTACAGAGATTAAAAA
AGATGGACCCCATTGATATTCAGACGGCACTGATGTTGATGAAGAATCTATCCTTCAATT
TATCGAGCCCTGAATTTGAGGATCATAGGAGGTTGCTTTCATCATACGGCTTGGGTGCTG
AAAAAGATAAAATGGGCCTTCCTATAAAAACTGATTTCAGAGGTAACGCAATCCAAGCTG
TCTAAGAAGCTGGAGGAAGGTTCAGATGATTCGTGGTCATTGCATATGATTGGTGGAGAC
AATGGTACGAAGAGAACCGTGTAATGAAAAGATGTGCATCTAGTATGTTCATATGCTTCA
AACTTGCAAGTTTCCCGTATGTTGCCATCTCCATCCTGTATATATCTCGTTGGGGGGAGA
ATGTGGGAGCAGTGTATGCTTTGAGAGGTTGTATGTACTTGTGGAGAGTAGATTATATAG
GGCTTGAGCTGTATTATAGGTAGATTATGTAGTGCTTGTGTTGTATGTTGTGCCCCTCAT
TGGTTTTGTCCTACAAACGCGCAATGGATCAGACACTTTGTAGCAGTGTGTTTGGCATAC
TTGTTTGAGATGTTGAGAAGAAACGAAAATGACCTGTGGTTTGAGTAAATGGATCAATGA
TATAATGCTTGTGAAAAAATACTCTAGGTGGAGAGGAAGCAAAGTGCTATAATAAGGGGT
GTTAAAAATGAGCTCAAATATAGAGATAACCTGCCTAACTCGCCTAGAATTTTAAGGTTG
GGTTCATTTGAATTGAGTCAATCTTAACGCATTATAGCTTTCATTTAAGAAAATTCTCAA
TTGAGC
