Microarray Probes on PGSC0003DMT400000459

Probe IDChipProbe Sequence
CUST_2828_PI426222305 JHI_St_60k_v1 GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000459

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Source Transcript PGSC0003DMT400000459 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G01770.1 +1 0.0 614 337/562 (60%) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). | chr1:278759-282490 FORWARD LENGTH=632

Transcript Sequence (2296 bp)

>PGSC0003DMT400000459 2296 pgsc_dm_v3.4
TTGCTAAGAAGTTCATATTATTTTTTTTGATGAATCCATAAAATTTTTAGCATCAATGTT
TAGCAGAAGGAATTGATTATTGAACGATTGATAGGGTTGTAATGGAAGAACTAGGTGTTG
ATACACCTGTGAGTTATGACTGTGAGATCAGACTGAGGGTGAATCCTCAAAGGCGAAAGG
AAAAGGTTTACGTAGGTTGTGGTGCTGGATTTGGAGGTGATCGACCAATAGCAGCGTTAA
AGCTACTTCAGAGGGTGAGGGAGTTGGATTATTTAGTGCTGGAATGCCTAGCAGAGCGCA
CCCTGGCTGAGCGCTATCAGGCCATGAAATCTGGTGGCGAGGGTTATGATCCCCGTATTT
GGTATAGTCTCAGAGTGGATGCAACTGCTCTTGCCTTTGGCTGTGGAGAATGGAGTTTGC
ATTATTACAAACATGGGTGCAAATGATCCATTTGGCGCTCGGGATGAAGTTTTACGACTT
GCAAGCGGACTGGGCATCTCTATAACTGTTGGTCTGGCTCATCAAGTTGCTGTTGTCAGA
TCAGATTTGGAGGAGCACCTTAAACATGTTGATGATGTTAGTGTGTATCTAGGAGCAGCT
CCTATTGTTGAATGTCTTCAGAATTTCAGACCGAATGTAATTATTACTTCTCGAGTTGCT
GATGCTTCCTTATTCTTAGCCCCAATGGTGTATGAGCTCGGTTGGAACTGGGATGACTTG
CACCTGCTTGCCCAAGGTTCACTGGCTGGCCACCTGCTAGAATGTGGTTGCCAACTTACT
GGAGGATACTATATGCATCCAGGAGATAAATACCGTGATATATCTCTGCAAGATCTCCTA
GATTTATCTCTTCCTTTTGCGGAAGTTAGCTTTGATGGGAAAGTATGTGTAGCAAAGGCG
GAAAGCAGTGGTGGGGTTTTGAATCCCTGCACGTGTGCTGAGCAGCTTCTGTATGAAGTG
GGGAATCCTAGTAGCTACATAACCCCAGACGTGGTTGTAGATTTTCAAGATGTTTCATTT
CAGACATTATCAAGCAGTAAAGTTCTCTGTGCTGGGGCAAAACCATCTGCAGCAGCTCCT
AATAATCTGTTGCTGCTGGCCTCCAAGGACAAGGGGTGGAAGGGCTGGGGAGAGATATCC
TATGGTGGATATCAGTGTGTTAAACGTGCTAAAGCTGCTGATTTTTTGGTAAGATCATGG
ATGGAAGAAGTATACCCTGGCATAAGCAAACATATAGTTTCCTATATCATTGGACTGGAT
AGCCTGAAAGCTGTTAGCATAGATGAAGATTTGCCAAGGGATAGTCAAGATATTAGATTA
CGAATGGATGGTTTATTTGAGAATAAGGAACAAGCAATCCACTTTACAAAAGAGTTCATA
GCATTATATACAAATGGACCTGCTGGTGGTGGCGGTATCAGCACTGGACACAAAAAAGAC
ATCATTCTTGAGAAAGCACTGGTAAAACGTAAAGATGTTCAGTGGCATATGACAGCAACA
AGAAATAAAATTATGCAATCAGATGATCTGGCTAGCCCTAAAAACATAATACAGACCAGT
TCATTCCATGAATCAGTCTTGCAATCACTTACAATGGAAACTACTTTGAATCACAAAGAA
GGTTCACCGCAAATTGAGCTGATCTCCCCTGCTCCACATGACAGGAAGATTCCTCTTTAT
GATTTTGCACATAGCAGAGCTGGTGATAAAGGGGATGATATAAACTTTTCCCTTATCCCA
TATTTTCCTCCAGATATTGAAAGGCTTAAGAAGATTGTAACTCAAGAATGGGTGAAAAAA
GTTGTCTCAAGTCTTCTTAATCCCTCTTCTTTTCCCACTTCTGATGATATTGAACAAAGA
AACAAATGGATCAGTGAACATGTTGAAGTGGAGATTTATGAAGTCAGAGGGATCCATTCT
TTGAATATAGTGGTTCGTAATATCCTAGATGGAGGTGTGAACTGCTCAAGGAGAATCGAT
AGGCATGGAAAGACTCTATCCGATCTCATATTGTGCCAGAAAGTGTTATTGCCTCTGTAA
TTGAACAGATGGCAAGACTGGAAAAGACACGCTGACTCCATTTTCTTTATCCTGGGAGGT
GATAGTAGTGACAGTGGGGTGGGGGACAAGCTCCTGGCCTAGCTACAAGTTGGAGTATAC
CAGAACCTGAAGACTTACTTTTGAAATAAAATTTGTTGTAGTACCAGTACATGTTCATAA
ACAAGTTGTCTGAACTCTTTATTCTGAAATAAAATTACTGTTGCAGAGTTTTTTACTCTT
TGTGAAAGCCATGAAT