Microarray Probes on PGSC0003DMT400000457

Probe IDChipProbe Sequence
CUST_2943_PI426222305 JHI_St_60k_v1 GCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTTGT

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000457

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Source Transcript PGSC0003DMT400000457 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G01770.1 +3 0.0 732 394/635 (62%) unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink). | chr1:278759-282490 FORWARD LENGTH=632

Transcript Sequence (2382 bp)

>PGSC0003DMT400000457 2382 pgsc_dm_v3.4
TATTATATTTGTTAAACTGGTCCTACAAACTTTACGATATGCATTGCCACGACTCAGATA
CTATATTACTTATTAGATCACGTAGAGCAGCAGTGGCAAAATTCTTTTTGAATTCTCTAA
CGAGCCGGCGAAAGGGACTACCAAAACTCAGATACTTCTGCCAATTTTTCAATCTCAACC
GTAATTTCAAGGTTGTAATGGAAGAACTAGGTGTTGATACACCTGTGAGTTATGACTGTG
AGATCAGACTGAGGGTGAATCCTCAAAGGCGAAAGGAAAAGGTTTACGTAGGTTGTGGTG
CTGGATTTGGAGGTGATCGACCAATAGCAGCGTTAAAGCTACTTCAGAGGGTGAGGGAGT
TGGATTATTTAGTGCTGGAATGCCTAGCAGAGCGCACCCTGGCTGAGCGCTATCAGGCCA
TGAAATCTGGTGGCGAGGGTTATGATCCCCGTATCTCAGAGTGGATGCAACTGCTCTTGC
CTTTGGCTGTGGAGAATGGAGTTTGCATTATTACAAACATGGGTGCAAATGATCCATTTG
GCGCTCGGGATGAAGTTTTACGACTTGCAAGCGGACTGGGCATCTCTATAACTGTTGGTC
TGGCTCATCAAGTTGCTGTTGTCAGATCAGATTTGGAGGAGCACCTTAAACATGTTGATG
ATGTTAGTGTGTATCTAGGAGCAGCTCCTATTGTTGAATGTCTTCAGAATTTCAGACCGA
ATGTAATTATTACTTCTCGAGTTGCTGATGCTTCCTTATTCTTAGCCCCAATGGTGTATG
AGCTCGGTTGGAACTGGGATGACTTGCACCTGCTTGCCCAAGGTTCACTGGCTGGCCACC
TGCTAGAATGTGGTTGCCAACTTACTGGAGGATACTATATGCATCCAGGAGATAAATACC
GTGATATATCTCTGCAAGATCTCCTAGATTTATCTCTTCCTTTTGCGGAAGTTAGCTTTG
ATGGGAAAGTATGTGTAGCAAAGGCGGAAAGCAGTGGTGGGGTTTTGAATCCCTGCACGT
GTGCTGAGCAGCTTCTGTATGAAGTGGGGAATCCTAGTAGCTACATAACCCCAGACGTGG
TTGTAGATTTTCAAGATGTTTCATTTCAGACATTATCAAGCAGTAAAGTTCTCTGTGCTG
GGGCAAAACCATCTGCAGCAGCTCCTAATAATCTGTTGCTGCTGGCCTCCAAGGACAAGG
GGTGGAAGGGCTGGGGAGAGATATCCTATGGTGGATATCAGTGTGTTAAACGTGCTAAAG
CTGCTGATTTTTTGGTAAGATCATGGATGGAAGAAGTATACCCTGGCATAAGCAAACATA
TAGTTTCCTATATCATTGGACTGGATAGCCTGAAAGCTGTTAGCATAGATGAAGATTTGC
CAAGGGATAGTCAAGATATTAGATTACGAATGGATGGTTTATTTGAGAATAAGGAACAAG
CAATCCACTTTACAAAAGAGTTCATAGCATTATATACAAATGGACCTGCTGGTGGTGGCG
GTATCAGCACTGGACACAAAAAAGACATCATTCTTGAGAAAGCACTGGTAAAACGTAAAG
ATGTTCAGTGGCATATGACAGCAACAAGAAATAAAATTATGCAATCAGATGATCTGGCTA
GCCCTAAAAACATAATACAGACCAGTTCATTCCATGAATCAGTCTTGCAATCACTTACAA
TGGAAACTACTTTGAATCACAAAGAAGGTTCACCGCAAATTGAGCTGATCTCCCCTGCTC
CACATGACAGGAAGATTCCTCTTTATGATTTTGCACATAGCAGAGCTGGTGATAAAGGGG
ATGATATAAACTTTTCCCTTATCCCATATTTTCCTCCAGATATTGAAAGGCTTAAGAAGA
TTGTAACTCAAGAATGGGTGAAAAAAGTTGTCTCAAGTCTTCTTAATCCCTCTTCTTTTC
CCACTTCTGATGATATTGAACAAAGAAACAAATGGATCAGTGAACATGTTGAAGTGGAGA
TTTATGAAGTCAGAGGGATCCATTCTTTGAATATAGTGGTTCGTAATATCCTAGATGGAG
GTGTGAACTGCTCAAGGAGAATCGATAGGCATGGAAAGACTCTATCCGATCTCATATTGT
GCCAGAAAGTGTTATTGCCTCTGTAATTGAACAGATGGCAAGACTGGAAAAGACACGCTG
ACTCCATTTTCTTTATCCTGGGAGGTGATAGTAGTGACAGTGGGGTGGGGGACAAGCTCC
TGGCCTAGCTACAAGTTGGAGTATACCAGAACCTGAAGACTTACTTTTGAAATAAAATTT
GTTGTAGTACCAGTACATGTTCATAAACAAGTTGTCTGAACTCTTTATTCTGAAATAAAA
TTACTGTTGCAGAGTTTTTTACTCTTTGTGAAAGCCATGAAT