Microarray Probes on PGSC0003DMT400000382
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2934_PI426222305 |
JHI_St_60k_v1 |
TTTTGCAGTATCACTAAAACTCTTGAGAGGTACCAACGTTGTTGTCTTAATCCTCAAGAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000382
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000382 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G45650.1 |
+2 |
4e-48 |
165 |
102/208 (49%) |
AGAMOUS-like 6 | chr2:18804453-18806291 FORWARD LENGTH=252 |
Transcript Sequence (1003 bp)
>PGSC0003DMT400000382 1003 pgsc_dm_v3.4
AAAACATCAAAAAGTTTCAAACTTTGTCTTCTTTATACCTTTTCATCCTTAGATCTTGAA
GTCCTTTCAATGATTTCTACTTCATATACCAAACTCATACATTTTCTTCTGTTGTGACAA
AATCCTTTGTGTAAAAGAGAGTGTTGTACTAAACTGCACATCAAAAAGTAGTGGCATATG
CCTGTTAAAAGGGAATTTGTTCATATTTGAGATTTCTTGCATTTATCAGTTTTGCAGTAT
CACTAAAACTCTTGAGAGGTACCAACGTTGTTGTCTTAATCCTCAAGACAATTGTGGTGA
AAGAGAAACACAGAGCTGGTACCAAGAGGTCTCTAAATTAAAGGCCAAGTTTGAAGCCCT
TCAACGAACTCAAAGGCACTTGCTTGGTGAAGATCTTGGAGCATTGAGTGTGAAGGAGTT
GCAAAATCTTGAAAAACAACTTGAAGGTGCACTTGCACAAGCTAGGCAAAGAAAGACACA
AATAATGATGGAACAGATGGAGGAGCTTCGTAGAAAGGAGCGTCATCTTGGTGATGTGAA
CAAGCAGCTGAAGATTAAGGTTTCTCTTGAACTATCATCGTTTGAGGGTGAAGGACAAGG
TGGAGTGAGAGGTGTTCCTTTTCCATGGAGTTGTAATGCATCATTAGATGAAGCTGGAAG
CAGCACCTTTCATGTTCACCATTCTCAATCAAATCAAATGGACTATGATTTACCTGATCC
AGTTCTTCAAATAGGGTATCATCAGTATATGGCTGCAGATGGAGCCTCAGGGTCAAGGAG
CATGGCTGTTGAGAGTAACATCATTCATGGCTGGGGTCTTTAATTTCTAATTCTAATTAT
GGATATACTAGTACAAGTTTTTTGCTTTAAGTTTTTCAGATTAAAAACTAAGTGACATAT
AATTATGATTTGAAATGCTTGTTATATAGTAATGTATAATTTTAGTAAGTGTTATGTACA
CTACTCTTTTTAACTTTATAAGTTTTTTCCATTTTCTCACAAA
