Microarray Probes on PGSC0003DMT400000353
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_3165_PI426222305 |
JHI_St_60k_v1 |
CTGTTGTTTTTTCCCTGATCCTTTCTAGGAGGGGGTTTCATGTATTATAAATTCTAGTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000353
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000353 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G00900.1 |
+3 |
0.0 |
1337 |
677/865 (78%) |
ER-type Ca2+-ATPase 2 | chr4:382690-386226 REVERSE LENGTH=1054 |
Transcript Sequence (3777 bp)
>PGSC0003DMT400000353 3777 pgsc_dm_v3.4
GTTGACTCTGGAAATTCCAATTATGCCACATAAATTGGGACGGAGGGAGCATAGTAGTGC
TTCTTTGCTCAAACTGTTAATTCTTATATCTCTTTTCAGGGAATGAGATTATTGAGGATA
ATTTCTGTGGAATTTAAGTAAGACTGAGGATTCAATTTGCGATGGAAGAAAAACCATTCC
CTGCCTGGTCCTGGTCTGTCGATCAGTGTCTAAAAGAGTACCAAGTAAAATTAGAGAAGG
GTCTAAGCACTTATGAAGTAGAGAAGAGGCGAGAAAGATATGGTTTGAATGAACTTGAGA
AAGAAAAGGGGAAGCCTTTGTGGAGGCTTGTTTTGGAGCAGTTTGATGATATGCTTGTCA
AAATCCTCCTTGGTGCAGCCTTCATCTCATTTGTTCTAGCTTATCTGCATCAGGATGAGA
CTGGAGAGTCAGGGTTCGAGGCCTATGTAGAACCCATAGTAATCCTGTTGATCTTAGTAC
TCAATGCAATCGTCGGAGTTTGGCAAGAAAGCAATGCTGAGAAAGCACTGGAAGCATTAA
AAGAGATGCAAGGTGAGTCTGCGAAGGTACTCAGAGATGGATATTTAGTACCGGATTTAC
CAGCAAAGGAGCTTGTTCCAGGGGATATCGTGGAACTGCGAGTTGGTGACAAAGTGCCAG
CTGATATGAGAGTTGCCACTTTAAAATCCTCAACCCTAAGGGTTGAACAAAGTTCTTTGA
CAGGGGAGTCGATGCCAGTTACTAAAAGCACCGATTTCCTTGCTATGGATGATTGTGAAT
TGCAGGCCAAAGAGAACATGGTTTTTGCTGGAACGACAGTTGTGAATGGTAGCTGCATCT
GCATTGTTGTGAACACGGGGATGTGCACAGAAATTGGTAATATTCAAAGACAAATCCATG
ATGCATCAATGGAAGAAAGTGATACCCCTTTGAAGAAGAAACTTGATGAATTTGGTAATA
GGCTTACATCTGCCATTGGCGTTGTTTGCTTAGTTGTGTGGGCAATCAACTACAAATATT
TTCTTTCCTGGGAGGTTGTGGATGGCTGGCCTTCTAATGTCCGTTTCTCATTTGAGAAAT
GCACATATTATTTCAAGATAGCTGTTGCTCTTGCAGTGGCTGCAATTCCCGAAGGTCTCC
CAGCTGTAATTACAACTTGCTTAGCTCTTGGTACAAGGAAAATGGCACAAAAGAACGCAA
TTGTGAGGAAACTTCCAAGCGTGGAAACCTTAGGATGCACAACTGTGATTTGTTCAGATA
AAACAGGAACCTTGACTACCAATCAAATGTCTGTGTCAGAATTCTTCACATTGGGAGGGG
AAACTACAGCCTGTCGAGTTTTTGGCGTCGAAGGTACAACTTATGACCCTAAGGATGGAG
GAATAATGGGCTGGAATTGTTCCAAAATGGATTCTAACTTGCTACTCATGGCTGAAATAT
GTGCAATCTGCAATGATGCTGGGGTCTTCTGTGATGGTCGTCTGTTCAAAGCAACTGGAT
TGCCTACTGAGGCAGCTCTTAAAGTTTTGGTGGAAAAGATGGGAGTACCAGATAGCAAAG
CAAGGAGCAAGATTCGCGACGCACAGATTGTATCGAGCTATTTGATTGATCGCAACACAG
TTAAATTAGGATGCTGTGATTGGTGGATGAAAAGATCAAAAAGGGTTGCAACATTGGAAT
TTGATCGTGTTCGCAAATCCATGGGTGTTATTGTGCGGGAGCTAAATGGGAGCAATCGAC
TTCTTGTCAAGGGTGCTGTTGAGAGTTTGCTAGAACGTAGTACATATGTTCAACTTGCAG
ATGGATCAACTGTTCCGATTGACGAGTCTTGTAGACAACTATTGTTGTTGAGGCACTTGG
AGATGAGCTCTAAGGGTCTGCGGTGCTTGGGCTTGGCATATAAAGATGACTTAGGTGAGC
TTTCTGGATACTATGCTGCGACTCATCCTGCCCACAAGAAGCTGCTTGATCCATCCTGCT
ACTCCTCCATAGAAAGTGATCTAGTTTTTGTGGGAGTTGTTGGTCTAAGGGACCCCCCAC
GTGAGGAAGTTCACAAGGCAATAAATGACTGCAGAAGAGCTGGGATCAAAATCATGGTTA
TAACTGGAGACAATAAATCCACAGCGGAGGCCGTTTGCAGGGAAATTCAGTTGTTTTCTA
ATGGTGAGAATCTTGGGAGGAGTAGTTTTACTGGCAAAGAATTCATGGCATTTTCCTCTC
AGCAACAAATTGAGATATTGTCACAAGATGGAGGCAAGGTCTTTTCTCGTGCTGAACCCA
GGCACAAACAAGAAATTGTAAGGATACTGAAGGAGATGGGTGAAATAGTTGCAATGACTG
GAGATGGTGTCAATGATGCACCTGCACTTAAACTTGCTGACATTGGAATAGCCATGGGTA
TTACAGGAACTGAGGTTGCAAAAGAAGCTTCTGATATGGTTCTGGCGGATGACAATTTCA
GTACTATAGTCTCTGCTGTTGCAGAGGGACGTTCGATCTACAATAACATGAAGGCCTTCA
TCAGATATATGATATCATCTAACGTTGGTGAAGTCATCTCCATTTTCTTGACTGCTGCTT
TGGGCATACCAGAATGTTTGATACCTGTGCAGTTGCTCTGGGTAAATTTGGTAACAGATG
GCCCACCTGCTACAGCCCTCGGATTTAACCCTGCTGATGTTGACATAATGCAGAAACCAC
CTAGGAAGAGCAATGAGGCTCTCATAAACTCCTGGGTTTTCTTCCGCTATATGGTCAGTA
AATCAGTTTGGATCACTATTTCTTATTCCTCGATGTGTATTACTATATGTTGCTGCATTT
GTTTTGTATCTTGCTACTTTGCTCTCTCTTTTCTAACAATCCTGCATCGGATACTGCCCT
TTTGAACCGAGAGTTTTACATTCTTATTCCTGAGATAATTTTCAGGTTATTGGTTCTTAC
GTGGGCATTGCAACTGTCGGTATATTTATAGTGTGGTACACCCAGGCTTCTTTCCTTGGT
ATTGATCTTGTGAGTGATGGCCACACGCTTGTTGAACTATCACAGCTTCGCAACTGGGGT
GAATGCTCAGCATGGCCAAATTTTACCGTGAGTCCATTCAAGGCTGGTAACCGCCTGATT
ACCTTTTCTGACCCTTGTGAATATTTTACTGTTGGTAAAGTGAAGGCCATGACACTGTCA
CTCTCTGTCCTGGTGGCAATTGAGATGTTTAATTCTCTCAATGCCCTCTCTGAAGACAAC
AGCTTGATCAAAATGCCACCTTGGAGAAATCCTTGGCTCCTTGTTGCAATGTCAGTCTCG
TTTGCCCTACATAGCCTGATACTCTATGTTCCTTTCCTAGCAGATATATTTGGTATTGTC
CCACTAAGCCTAAATGAATGGCTTCTAGTCATCTTGCTTTCTGCACCTGTTATTCTTATT
GATGAAGTCCTCAAATTTGTGGGAAGGAGAAGAAGTAGAACTAAACTAAAAACTGCATAA
TGTATTCTTCCAGGATATGCTCGATTTTATTATTAGGTTTGATTAAAATGTATATTGTTC
AGAAATGAAAAATCTATTTGGGTTGATATTTGTAGAGGAACTCTAGAAGCTATATAGCCT
TTGATCACATGCCTTGGAAGGCTTCTAGTTATCATAAAATTCAAGGCTTCTGAAGCAAAA
ACCTGTTGTTTTTTCCCTGATCCTTTCTAGGAGGGGGTTTCATGTATTATAAATTCTAGT
TTTTATTATTTATTTATTGAATCTGCTATCTTACCGTAGATTTTGATGAACTTAAAC
