Microarray Probes on PGSC0003DMT400000352

Probe IDChipProbe Sequence
CUST_2927_PI426222305 JHI_St_60k_v1 CTGTTGTTTTTTCCCTGATCCTTTCTAGGAGGGGGTTTCATGTATTATAAATTCTAGTTT

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000352

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Source Transcript PGSC0003DMT400000352 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT4G00900.1 +3 0.0 1607 814/1051 (77%) ER-type Ca2+-ATPase 2 | chr4:382690-386226 REVERSE LENGTH=1054

Transcript Sequence (3605 bp)

>PGSC0003DMT400000352 3605 pgsc_dm_v3.4
GTTGACTCTGGAAATTCCAATTATGCCACATAAATTGGGACGGAGGGAGCATAGTAGTGC
TTCTTTGCTCAAACTGTTAATTCTTATATCTCTTTTCAGGGAATGAGATTATTGAGGATA
ATTTCTGTGGAATTTAAGTAAGACTGAGGATTCAATTTGCGATGGAAGAAAAACCATTCC
CTGCCTGGTCCTGGTCTGTCGATCAGTGTCTAAAAGAGTACCAAGTAAAATTAGAGAAGG
GTCTAAGCACTTATGAAGTAGAGAAGAGGCGAGAAAGATATGGTTTGAATGAACTTGAGA
AAGAAAAGGGGAAGCCTTTGTGGAGGCTTGTTTTGGAGCAGTTTGATGATATGCTTGTCA
AAATCCTCCTTGGTGCAGCCTTCATCTCATTTGTTCTAGCTTATCTGCATCAGGATGAGA
CTGGAGAGTCAGGGTTCGAGGCCTATGTAGAACCCATAGTAATCCTGTTGATCTTAGTAC
TCAATGCAATCGTCGGAGTTTGGCAAGAAAGCAATGCTGAGAAAGCACTGGAAGCATTAA
AAGAGATGCAAGGTGAGTCTGCGAAGGTACTCAGAGATGGATATTTAGTACCGGATTTAC
CAGCAAAGGAGCTTGTTCCAGGGGATATCGTGGAACTGCGAGTTGGTGACAAAGTGCCAG
CTGATATGAGAGTTGCCACTTTAAAATCCTCAACCCTAAGGGTTGAACAAAGTTCTTTGA
CAGGGGAGTCGATGCCAGTTACTAAAAGCACCGATTTCCTTGCTATGGATGATTGTGAAT
TGCAGGCCAAAGAGAACATGGTTTTTGCTGGAACGACAGTTGTGAATGGTAGCTGCATCT
GCATTGTTGTGAACACGGGGATGTGCACAGAAATTGGTAATATTCAAAGACAAATCCATG
ATGCATCAATGGAAGAAAGTGATACCCCTTTGAAGAAGAAACTTGATGAATTTGGTAATA
GGCTTACATCTGCCATTGGCGTTGTTTGCTTAGTTGTGTGGGCAATCAACTACAAATATT
TTCTTTCCTGGGAGGTTGTGGATGGCTGGCCTTCTAATGTCCGTTTCTCATTTGAGAAAT
GCACATATTATTTCAAGATAGCTGTTGCTCTTGCAGTGGCTGCAATTCCCGAAGGTCTCC
CAGCTGTAATTACAACTTGCTTAGCTCTTGGTACAAGGAAAATGGCACAAAAGAACGCAA
TTGTGAGGAAACTTCCAAGCGTGGAAACCTTAGGATGCACAACTGTGATTTGTTCAGATA
AAACAGGAACCTTGACTACCAATCAAATGTCTGTGTCAGAATTCTTCACATTGGGAGGGG
AAACTACAGCCTGTCGAGTTTTTGGCGTCGAAGGTACAACTTATGACCCTAAGGATGGAG
GAATAATGGGCTGGAATTGTTCCAAAATGGATTCTAACTTGCTACTCATGGCTGAAATAT
GTGCAATCTGCAATGATGCTGGGGTCTTCTGTGATGGTCGTCTGTTCAAAGCAACTGGAT
TGCCTACTGAGGCAGCTCTTAAAGTTTTGGTGGAAAAGATGGGAGTACCAGATAGCAAAG
CAAGGAGCAAGATTCGCGACGCACAGATTGTATCGAGCTATTTGATTGATCGCAACACAG
TTAAATTAGGATGCTGTGATTGGTGGATGAAAAGATCAAAAAGGGTTGCAACATTGGAAT
TTGATCGTGTTCGCAAATCCATGGGTGTTATTGTGCGGGAGCTAAATGGGAGCAATCGAC
TTCTTGTCAAGGGTGCTGTTGAGAGTTTGCTAGAACGTAGTACATATGTTCAACTTGCAG
ATGGATCAACTGTTCCGATTGACGAGTCTTGTAGACAACTATTGTTGTTGAGGCACTTGG
AGATGAGCTCTAAGGGTCTGCGGTGCTTGGGCTTGGCATATAAAGATGACTTAGGTGAGC
TTTCTGGATACTATGCTGCGACTCATCCTGCCCACAAGAAGCTGCTTGATCCATCCTGCT
ACTCCTCCATAGAAAGTGATCTAGTTTTTGTGGGAGTTGTTGGTCTAAGGGACCCCCCAC
GTGAGGAAGTTCACAAGGCAATAAATGACTGCAGAAGAGCTGGGATCAAAATCATGGTTA
TAACTGGAGACAATAAATCCACAGCGGAGGCCGTTTGCAGGGAAATTCAGTTGTTTTCTA
ATGGTGAGAATCTTGGGAGGAGTAGTTTTACTGGCAAAGAATTCATGGCATTTTCCTCTC
AGCAACAAATTGAGATATTGTCACAAGATGGAGGCAAGGTCTTTTCTCGTGCTGAACCCA
GGCACAAACAAGAAATTGTAAGGATACTGAAGGAGATGGGTGAAATAGTTGCAATGACTG
GAGATGGTGTCAATGATGCACCTGCACTTAAACTTGCTGACATTGGAATAGCCATGGGTA
TTACAGGAACTGAGGTTGCAAAAGAAGCTTCTGATATGGTTCTGGCGGATGACAATTTCA
GTACTATAGTCTCTGCTGTTGCAGAGGGACGTTCGATCTACAATAACATGAAGGCCTTCA
TCAGATATATGATATCATCTAACGTTGGTGAAGTCATCTCCATTTTCTTGACTGCTGCTT
TGGGCATACCAGAATGTTTGATACCTGTGCAGTTGCTCTGGGTAAATTTGGTAACAGATG
GCCCACCTGCTACAGCCCTCGGATTTAACCCTGCTGATGTTGACATAATGCAGAAACCAC
CTAGGAAGAGCAATGAGGCTCTCATAAACTCCTGGGTTTTCTTCCGCTATATGGTTATTG
GTTCTTACGTGGGCATTGCAACTGTCGGTATATTTATAGTGTGGTACACCCAGGCTTCTT
TCCTTGGTATTGATCTTGTGAGTGATGGCCACACGCTTGTTGAACTATCACAGCTTCGCA
ACTGGGGTGAATGCTCAGCATGGCCAAATTTTACCGTGAGTCCATTCAAGGCTGGTAACC
GCCTGATTACCTTTTCTGACCCTTGTGAATATTTTACTGTTGGTAAAGTGAAGGCCATGA
CACTGTCACTCTCTGTCCTGGTGGCAATTGAGATGTTTAATTCTCTCAATGCCCTCTCTG
AAGACAACAGCTTGATCAAAATGCCACCTTGGAGAAATCCTTGGCTCCTTGTTGCAATGT
CAGTCTCGTTTGCCCTACATAGCCTGATACTCTATGTTCCTTTCCTAGCAGATATATTTG
GTATTGTCCCACTAAGCCTAAATGAATGGCTTCTAGTCATCTTGCTTTCTGCACCTGTTA
TTCTTATTGATGAAGTCCTCAAATTTGTGGGAAGGAGAAGAAGTAGAACTAAACTAAAAA
CTGCATAATGTATTCTTCCAGGATATGCTCGATTTTATTATTAGGTTTGATTAAAATGTA
TATTGTTCAGAAATGAAAAATCTATTTGGGTTGATATTTGTAGAGGAACTCTAGAAGCTA
TATAGCCTTTGATCACATGCCTTGGAAGGCTTCTAGTTATCATAAAATTCAAGGCTTCTG
AAGCAAAAACCTGTTGTTTTTTCCCTGATCCTTTCTAGGAGGGGGTTTCATGTATTATAA
ATTCTAGTTTTTATTATTTATTTATTGAATCTGCTATCTTACCGTAGATTTTGATGAACT
TAAAC