Microarray Probes on PGSC0003DMT400000230
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_3267_PI426222305 |
JHI_St_60k_v1 |
CTGATCGAGATAAGTAAGAAATCAGCATGTGATAAAGACACCCAAGCAGGTTATATTTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000230
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000230 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G23630.1 |
+3 |
2e-97 |
299 |
173/253 (68%) |
VIRB2-interacting protein 1 | chr4:12318070-12319574 FORWARD LENGTH=275 |
Transcript Sequence (1544 bp)
>PGSC0003DMT400000230 1544 pgsc_dm_v3.4
CATATTTCAAAATTAACTAAATTTAGGTTCGGAAAGCCGAGCCTCTGAGGCTCGGAGACA
TCCCTCGTTCACTTCACCGTTTTCAAAAACATAAATATCAATCGTTACACAATTTTCTCG
GCAATACAGTCGTTTCTTATTCACTCTCTCAGTCTTTGAAAATATCTGCTTTGGTTGATT
GAATCGGAGCTCTGAATCAGAAAATGGCCGAGCACGCTGAGAATTCGGATCCTAAAGGGG
AGTCGTTGATGGAGAAGATCGCCGACAAGTTTCACGGTGACGATTCCTCATCGTCGTCGG
AATCAGATACCGAGACGAAGAAGCCGGTAGTGAAATCGGAGGTAGAGGCGGAGCCGGAGC
CGGAGACGTTGAAGAACAAAGTTTGGAGGCTATTTGGAAGAGAAAAACCGGTTCACAAGG
TTTTCGGTGGAGGCAAACCTGCTGATGTATTCTTGTGGAGGAACAAAAAGATATCTGGTA
CTGTACTTGGTGGAGCAACTGCTATCTGGGTTCTTTTCGAATTGCTTGAGTACCACCTGC
TCACTTTAATCTGTCACATTTTGATCATCACTCTTGCAGTTTTGTTCTTATGGTCAAATG
CAACCACCTTTATTAACAAAAAACCTCCTCATATCCCAGAAGTCCACCTTCCAGAGGGCC
CCATCCTTCAGGTGGCTTCTGCCCTGAGGATCGAAATTAATCGCGCTCTTGATCTACTGA
GAGAAATTGCGTCAGGGAGAGAACTGAAGAAGTTTCTTGCTGTCATTGCTGGTTTGTGGA
TACTCTCAATTGTTGGTAGCTGGTGCAACTTTTTGACACTGTTCTATATATCATTTGTGC
TCCTCCACACAATTCCTGTTCTTTATGAGAAATATGAAGATAAAGTGGATCCATTAGCCG
AGAAAGCAATGCACGAGATCAAGAAGCAATATGCCGTGTTTGATGCAAAGGTTTTGAGTA
AAATTCCACGAGGACCACTGAAAGATAAGAAGAAGGATTAGATGTGGTGGTGCTTCGTTC
CTGCTAGAGAGATTTGGGTAGCTGCTCCACCTTTTCAAAATGTAATAGTGCTTCTCTTGT
TTTACATGAGGATGAGTGTTATCCTTGCTTATATTTGGGGTTTTATTAACTGGGGATAAA
TCTAGAAACAAACAGTTGGGAGGATTAGTCTGTTAGGTGTGAGTGTGTATTTGACTGTCG
TTTCACAGGATGTCATTGTATAAGTTCAACTAAATTTACATTGTGTTCTTCTGCACTTGT
TTGTATTGCTTTCACTTGTATCAACGTTGGGATGGTCCAACCTGTTGATACATAGCCGCC
TGAATCAAACTTGATCTGTCTGTTGTTCAGTTGGTTGATTCCAGTTTGTGGTTTCATTAC
TGGATTTGGGCTGGTATATGTACAGGAAGAAATGAAGATGTAAGGCTTATCAAATAATTG
GTGTAAGCTGTAAAATCTTGAGCTCTTCATTTATTGTCATTGTGCTGATCGAGATAAGTA
AGAAATCAGCATGTGATAAAGACACCCAAGCAGGTTATATTTTG
