Microarray Probes on PGSC0003DMT400000220
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2887_PI426222305 |
JHI_St_60k_v1 |
AGATCTCTTACACTCTCAAATGCTCCGGCAGGGTTATAGTATCAGGAACAATTCCAGATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000220
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000220 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G01470.1 |
+1 |
8e-56 |
180 |
83/151 (55%) |
Late embryogenesis abundant protein | chr1:172295-172826 REVERSE LENGTH=151 |
Transcript Sequence (879 bp)
>PGSC0003DMT400000220 879 pgsc_dm_v3.4
CTTTGAAGCTAAATAAATATCTATTCCTCAAGCACTACATAAATTTTCAATCTAGGTTTA
AAAATAGAAGCTAGAATGGCAGATTTCATGGAGAAAGCGATGAATTTCGTGTCGGAGAAG
GTGGGGAATATGGAGAAACCGGAGGCTGATATCACAGACTTTGATCTGAAAAAAGTTAGC
ATGGACAGCATTTCATATCATGCCAAAGTGGCCGTGAAAAACCCTTACTCTGTTCCTGTA
CCCATCATGCAGATCTCTTACACTCTCAAATGCTCCGGCAGGGTTATAGTATCAGGAACA
ATTCCAGATCCAGGGAATATAAAAGCAAATGACACAACCATTTTAGATGTGCCAGTGAAG
GTTCCTCACAGTATGCTAGTGAGTTTGGGTAAGGATATTGGTAAAGATTGGGACATTGAC
TATAAACTGGAATTGGGTCTCGCCATTGACCTTCCAGTCATTGGGAATTTCACAATCCCA
CTCTCTCATAGCGGCGAGATCAAGCTTCCATCACTCTCCGACTTATGGAACGGTGACAAA
GAAGAAGACACTGAAAAAGAGATCTGAAAGTAGCGCGCTAATAATAATATTACTACTAAC
TAATACTGTACTTTCATTATGGGTGTTTTTATGTATTTTGTTTGATTTTCCAAAAAGCCT
AAACCCAGTTTTGGGGTTTAATTAAAAATTACAAGTGTACTTTTCTTATTTTGTGCTGCG
CGCTACACTTTATTTTTAGTAGAACCACATGATATAATTAAGATATATATGGCACGGAAC
AAAGGTTTTTATGTGTATAGTATGTGCAACCTAACATGGGTTGTGGGTCGTGTACAGTTG
TAAAACTGCTCCACTCTTAACAGAGGTCTCAGGTTTGGA
