Microarray Probes on PGSC0003DMT400000217
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_3046_PI426222305 |
JHI_St_60k_v1 |
GTGATTCTAGATGCATTTAGAAGTACAGTAGCTGGATGATGGATATCTGCTAAATTGAGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000217
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000217 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G61540.1 |
+2 |
3e-138 |
414 |
236/306 (77%) |
alpha/beta-Hydrolases superfamily protein | chr3:22773399-22775699 FORWARD LENGTH=515 |
Transcript Sequence (1643 bp)
>PGSC0003DMT400000217 1643 pgsc_dm_v3.4
CAAAATGCGGGCACTTCACTCATCATTCATAAAACCCCTCATTCGTCTTCATAGCCCATT
TTCGACTCCCATTATTTCACCATCTCCACTTCGAAAACAATTTCTCTACTTGCACTCCTC
CGCTACTACTTCACTCCAAAAGCTAACCGCCATGGCCGACAACAAGACGGCAGCCGTCGA
CGGCAACTCTACCTCTGACCACGTCTCCGACGCTTGGTACTCCGTTCCCGAGCTCCGATT
ACGCGATCACCGATTCACCGTTCCTCTCGATTACTCTATCGATCGCTGTTCCTCTACTAA
AATCACAGTCTTCGCTCGTGAAGTAGTTGCTGTTGGTAAGGAGGAACAATCTCTGCCATA
TCTACTATATTTGCAAGGTGGACCAGGCTTTGAATGCCCAAGACCAACTGAAGCTGGAGG
ATGGATAAGCAGAGCATGTGAGGAGTACCGTATTGTTTTAATGGATCAGAGAGGAACAGG
TCTATCAACACCATTAACACCATCATCTATGTCACAAGTGAAGTCTGCTGAGGATTTGGC
TAACTACTTGAGACATTTCCGAGCTGATAATATAGTACATGATGCTGAGTTCATCCGAAA
ACGCCTTGTCCCTGATGCTGGACCTTGGACAATACTTGGACAGAGTTTCGGAGGCTTTTG
TGCAGTTACCTACTTGAGTTTTGCTCCTCAAGGACTCAAACAAGCTCTTATAACTGGTGG
GCTCCCTCCAATTGGTGAAGGATGCACAGCTGATTCTGTTTATAAGGCAGGATTTGAGCA
GCTTGTTTGTCAGAACGAAAAATATTACAAGAGGTTTCCACAGGATATTGAAATTGTTCG
TGATGTTGTAAATTATTTGGCAGAGTCAGGAGGCGGGGTACCTCTTCCATCTGGTGGCAT
CTTAACACCTCGAGGACTACAACTTCTTGGTCTCTCAGGTCTAGGGTCAAGTACTGGTTT
TGAACGACTGCATTACCTGTTTGAGAGAGTCTGGGATCCTTTAATAGTTCAAGGAGCAAA
AAGGAGAATCAGTGACTACTTCTTGAATGCTGAGATGCTAAGGATCTGAAACTTTGGCCC
ATTTTGTGCGAATGTGCTAGCAGCATTTTCTTGGTGATTCTAGATGCATTTAGAAGTACA
GTAGCTGGATGATGGATATCTGCTAAATTGAGTTCTATGTGGCATTGCAGTATGAGAGAT
GGATCGGATTTGATGCAAACCCTTTATATGCTCTTTTGCATGAAAGCATATATTGCCAGG
GTGCCTCATCCCTGTGGTCTGCTCAGAGAATTAGGGCTCTAAATGACAACAAATTTGATG
CAATTGAGGCAGCAAAAGTTGGCCGCCCTGTACTTTTTACTGGAGAGGTGAGACACAATG
TGGTCGTTTTTGGTTAAGAACTGCCACAATATGAAGCAAGCGTCAAACAGAAAAAAAGTT
TTACTTCCACCTTAATTTCTCTGATACATCTTCCACATTAAAGGGTTCTGTCCTCGAGAG
GGCCTAAACTACAGCTTATATTTAACTAACCAAACCACCTCTCCTCATTATTGTTAACGT
AATATGTATGTCTTGCGCAAAAAAAATCACTATATATTCATAATTATTGGAAGTTATTAT
AGATATATGACAAGAGCTGTAAA
