MLOC_9970 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_9970_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_9970_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.28506 | 1.3387 | 1.63246 | 1.43461 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.00212 | 1.29481 | 1.31715 | 1.02177 |
INF1 | Young developing inflorescences (5mm) | 3.12387 | 3.20696 | 3.57312 | 2.83531 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.32745 | 5.09184 | 5.63121 | 5.84736 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.24389 | 1.79016 | 1.94559 | 2.05291 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.942307 | 1.32297 | 1.92636 | 4.36216 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.65043 | 2.31576 | 2.70674 | 2.49394 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.98653 | 2.80894 | 3.02243 | 6.84546 |
CDS Structure of MLOC_9970
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_9970.8
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g33350.1 |
+3 |
5e-136 |
430 |
253/491 (52%) |
13106.m03444 protein plant protein of unknown function domain containing protein, expressed |
TAIR PP10 |
AT3G50140.1 |
+3 |
5e-47 |
179 |
148/457 (32%) |
Plant protein of unknown function (DUF247) | chr3:18592472-18594562 REVERSE LENGTH=539 |