MLOC_9970 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.285061.33871.632461.43461
LEAShoots from the seedlings (10 cm shoot stage)1.002121.294811.317151.02177
INF1Young developing inflorescences (5mm)3.123873.206963.573122.83531
INF2Developing inflorescences (1-1.5 cm)5.327455.091845.631215.84736
ROORoots from the seedlings (10 cm shoot stage)1.243891.790161.945592.05291
NODDeveloping tillers at six leaf stage, 3rd internode0.9423071.322971.926364.36216
CAR5Developing grain, bracts removed (5 DPA)2.650432.315762.706742.49394
CAR15Developing grain, bracts removed (15 DPA)2.986532.808943.022436.84546



CDS Structure of MLOC_9970






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_9970.8
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_9970.8CUST_17128_PI427708080AvailableAvailablecontig_1558162 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g33350.1 +3 5e-136 430 253/491 (52%) 13106.m03444 protein plant protein of unknown function domain containing protein, expressed
TAIR PP10 AT3G50140.1 +3 5e-47 179 148/457 (32%) Plant protein of unknown function (DUF247) | chr3:18592472-18594562 REVERSE LENGTH=539