MLOC_9957 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 393.593 | 281.967 | 277.806 | 276.181 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1080.56 | 139.004 | 561.713 | 451.227 |
| INF1 | Young developing inflorescences (5mm) | 102.352 | 20.5397 | 20.0067 | 40.4948 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.12861 | 13.8428 | 33.7402 | 16.6648 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.16875 | 37.4525 | 58.9435 | 33.7748 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.207431 | 0.0915916 | 0.0149013 | 0.152073 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.22989 | 2.85671 | 2.82113 | 2.36446 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.196667 | 0.0918344 | 0.111767 | 0.35226 |
CDS Structure of MLOC_9957
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_9957.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g35760.1 |
-2 |
5e-125 |
363 |
177/195 (91%) |
13108.m03751 protein Cupin domain containing protein, expressed |
| TAIR PP10 |
AT1G72610.1 |
-2 |
3e-69 |
219 |
110/178 (62%) |
| Symbols: GLP1, ATGER1, GER1 | germin-like protein 1 | chr1:27339302-27339928 REVERSE LENGTH=208 |
