MLOC_9944 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.11104 | 27.3717 | 26.8174 | 17.5601 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 33.8344 | 37.2305 | 16.8919 | 22.1619 |
| INF1 | Young developing inflorescences (5mm) | 63.4835 | 57.391 | 65.3253 | 43.3421 |
| INF2 | Developing inflorescences (1-1.5 cm) | 84.5637 | 68.1521 | 75.1972 | 74.8303 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.45316 | 11.9248 | 14.0865 | 11.7442 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 22.9397 | 13.7094 | 21.0634 | 48.085 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 34.6102 | 28.3745 | 32.5335 | 27.2594 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 20.6942 | 20.9783 | 22.5664 | 40.9245 |
CDS Structure of MLOC_9944
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_9944.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g41590.1 |
+3 |
2e-73 |
243 |
155/216 (72%) |
13110.m03883 protein zinc finger, C3HC4 type domain containing protein, expressed |
| TAIR PP10 |
AT1G55250.3 |
+3 |
2e-34 |
133 |
91/215 (42%) |
| Symbols: HUB2 | histone mono-ubiquitination 2 | chr1:20607214-20612302 FORWARD LENGTH=899 |