MLOC_9902 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 28.2737 | 22.1221 | 24.174 | 25.1397 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 22.2568 | 14.3941 | 14.3223 | 15.3365 |
| INF1 | Young developing inflorescences (5mm) | 18.0308 | 16.2667 | 15.765 | 14.6281 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.1056 | 16.8929 | 17.7151 | 18.183 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 22.1939 | 22.1906 | 16.8531 | 27.4226 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 12.9029 | 16.2082 | 23.872 | 67.1738 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 21.9619 | 21.9631 | 19.446 | 21.4238 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.17783 | 4.40651 | 6.31176 | 11.6851 |
CDS Structure of MLOC_9902
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_9902.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g66300.1 |
+1 |
1e-146 |
429 |
254/293 (87%) |
13101.m07179 protein KH domain containing protein, putative, expressed |
| TAIR PP10 |
AT3G08620.1 |
+1 |
5e-89 |
280 |
149/246 (61%) |
RNA-binding KH domain-containing protein | chr3:2617925-2620314 FORWARD LENGTH=283 |
