MLOC_9850 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_9850_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_9850_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0.0183137 | 0 | 0.0464737 | 0.0352582 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.365757 | 0.582782 | 0.649946 | 0.567489 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.0356682 | 0.0205507 | 0.0630884 | 0.0367747 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0167178 | 0.0121492 | 0 | 0.0582563 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0193196 | 0.0529545 | 0.0212029 | 0.0332127 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0211593 | 0.0296962 | 0.0805037 |
CDS Structure of MLOC_9850
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_9850.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g46650.1 |
+2 |
5e-65 |
233 |
115/244 (47%) |
13102.m05237 protein ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed |
TAIR PP10 |
AT5G46740.1 |
+2 |
9e-64 |
229 |
125/310 (40%) |
| Symbols: UBP21 | ubiquitin-specific protease 21 | chr5:18965410-18968492 REVERSE LENGTH=732 |