MLOC_9823 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.052523.275263.146982.62877
LEAShoots from the seedlings (10 cm shoot stage)1.828140.06877590.2163030.660487
INF1Young developing inflorescences (5mm)13.175212.366312.20729.27672
INF2Developing inflorescences (1-1.5 cm)7.7675711.13219.078979.21342
ROORoots from the seedlings (10 cm shoot stage)0.4682051.20641.593611.23005
NODDeveloping tillers at six leaf stage, 3rd internode0.01771980.01710830.0360460.0650665
CAR5Developing grain, bracts removed (5 DPA)2.334332.087292.283931.90326
CAR15Developing grain, bracts removed (15 DPA)0.1963550.1312390.1605170.329263



CDS Structure of MLOC_9823






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_9823.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_9823.2CUST_17103_PI427708080AvailableAvailablecontig_1557881 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g37920.1 +1 0.0 884 517/899 (58%) 13109.m03769 protein helicase, putative, expressed
TAIR PP10 AT1G20720.1 +1 1e-106 362 250/599 (42%) RAD3-like DNA-binding helicase protein | chr1:7185658-7192794 REVERSE LENGTH=1175