MLOC_9815 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.923314.806815.849717.3487
LEAShoots from the seedlings (10 cm shoot stage)17.7719.5453713.969711.8121
INF1Young developing inflorescences (5mm)30.478734.130241.748930.4771
INF2Developing inflorescences (1-1.5 cm)39.683244.30745.762247.6182
ROORoots from the seedlings (10 cm shoot stage)17.463417.698315.213520.8474
NODDeveloping tillers at six leaf stage, 3rd internode12.969121.284917.261167.3684
CAR5Developing grain, bracts removed (5 DPA)24.588624.709923.641723.8671
CAR15Developing grain, bracts removed (15 DPA)13.420212.363113.66131.1865



CDS Structure of MLOC_9815






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_9815.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_9815.3CUST_17102_PI427708080AvailableAvailablecontig_1557849 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g29170.2 +3 0.0 610 336/383 (88%) 13109.m02889 protein CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT1G12680.1 +3 4e-143 423 240/399 (60%) | Symbols: PEPKR2 | phosphoenolpyruvate carboxylase-related kinase 2 | chr1:4320123-4322269 REVERSE LENGTH=470