MLOC_9793 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.88945 | 9.86772 | 8.99503 | 7.98249 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.56075 | 3.33979 | 3.68203 | 3.61534 |
| INF1 | Young developing inflorescences (5mm) | 29.2928 | 29.4745 | 26.345 | 22.9697 |
| INF2 | Developing inflorescences (1-1.5 cm) | 20.5092 | 21.3861 | 18.9543 | 21.3656 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.30918 | 6.60421 | 6.00559 | 6.90823 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.2885 | 0.240701 | 0.893205 | 1.14863 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.10143 | 7.50727 | 7.85145 | 7.08068 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.85706 | 3.11872 | 3.04928 | 7.45682 |
CDS Structure of MLOC_9793
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_9793.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g02110.1 |
+3 |
0.0 |
1826 |
930/1319 (71%) |
13103.m00159 protein WD domain, G-beta repeat domain containing protein, expressed |
| TAIR PP10 |
AT4G01860.2 |
+3 |
0.0 |
1058 |
595/1333 (45%) |
Transducin family protein / WD-40 repeat family protein | chr4:801713-808018 REVERSE LENGTH=1308 |
