MLOC_9699 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.40666000.29392
LEAShoots from the seedlings (10 cm shoot stage)3.2581200.669441.34194
INF1Young developing inflorescences (5mm)1.5988700.6874010.963207
INF2Developing inflorescences (1-1.5 cm)0000.149229
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.2372080.4464271.838052.37709
CAR5Developing grain, bracts removed (5 DPA)0000.304466
CAR15Developing grain, bracts removed (15 DPA)1.0667300.7723072.12082



CDS Structure of MLOC_9699






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_9699.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_9699.1CUST_11170_PI427708083AvailableAvailablecontig_154750 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g02780.1 -1 8e-36 127 60/71 (85%) 13104.m00194 protein amidase family protein, putative, expressed
TAIR PP10 AT1G08980.1 -1 1e-29 109 52/71 (73%) | Symbols: ATAMI1, AMI1, ATTOC64-I, TOC64-I | amidase 1 | chr1:2884455-2886430 FORWARD LENGTH=425