MLOC_9644 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.2203221.749317.404320.7478
LEAShoots from the seedlings (10 cm shoot stage)15.174316.148918.903717.4926
INF1Young developing inflorescences (5mm)9.734347.2423310.403810.3969
INF2Developing inflorescences (1-1.5 cm)15.586312.17976.3424617.1149
ROORoots from the seedlings (10 cm shoot stage)12.959220.312510.653829.3863
NODDeveloping tillers at six leaf stage, 3rd internode11.397917.24216.367368.353
CAR5Developing grain, bracts removed (5 DPA)11.76568.2101712.23814.2194
CAR15Developing grain, bracts removed (15 DPA)1.555261.739971.310985.76785



CDS Structure of MLOC_9644






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_9644.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_9644.1CUST_11160_PI427708083AvailableAvailablecontig_154121 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g55960.1 +2 6e-23 94 63/77 (82%) 13104.m05813 protein NADPH reductase, putative, expressed
TAIR PP10 AT4G30210.2 +2 1e-19 83 55/72 (76%) | Symbols: ATR2, AR2 | P450 reductase 2 | chr4:14796900-14800578 FORWARD LENGTH=711