MLOC_9606 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.347449 | 8.83822 | 4.85544 | 3.77407 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.83984 | 10.8864 | 9.22576 | 5.9062 |
| INF1 | Young developing inflorescences (5mm) | 9.71857 | 9.91946 | 10.595 | 6.34932 |
| INF2 | Developing inflorescences (1-1.5 cm) | 29.8939 | 21.5995 | 20.2584 | 21.2705 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.242773 | 3.8291 | 2.20219 | 2.40073 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.659086 | 2.74979 | 1.65575 | 5.50736 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.01935 | 5.45598 | 8.54972 | 4.88972 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.21412 | 4.96432 | 5.89109 | 8.99362 |
CDS Structure of MLOC_9606
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_9606.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g23810.1 |
+2 |
6e-30 |
121 |
59/136 (43%) |
13109.m02254 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 |
AT1G33710.1 |
+2 |
3e-12 |
67 |
46/121 (38%) |
RNA-directed DNA polymerase (reverse transcriptase)-related family protein | chr1:12219657-12220289 FORWARD LENGTH=210 |
