MLOC_9563 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.569581.358761.670471.41387
LEAShoots from the seedlings (10 cm shoot stage)2.002471.796322.671991.7499
INF1Young developing inflorescences (5mm)1.701253.443094.363172.27736
INF2Developing inflorescences (1-1.5 cm)3.46844.056542.967013.68174
ROORoots from the seedlings (10 cm shoot stage)2.377220.74956301.70148
NODDeveloping tillers at six leaf stage, 3rd internode1.051841.730122.634825.54383
CAR5Developing grain, bracts removed (5 DPA)1.77072.709181.341421.79612
CAR15Developing grain, bracts removed (15 DPA)1.307991.213671.916132.98595



CDS Structure of MLOC_9563






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_9563.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_9563.1CUST_11143_PI427708083AvailableAvailablecontig_153448 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g52460.1 -2 5e-51 137 65/74 (88%) 13103.m05714 protein glucose-1-phosphate adenylyltransferase large subunit, putative, expressed
TAIR PP10 AT5G19220.1 -2 6e-46 127 60/74 (81%) | Symbols: ADG2, APL1 | ADP glucose pyrophosphorylase large subunit 1 | chr5:6463931-6466775 REVERSE LENGTH=522