MLOC_9550 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains234.966139.382181.3330
LEAShoots from the seedlings (10 cm shoot stage)26.164543.015348.76370
INF1Young developing inflorescences (5mm)25.843533.779728.43050
INF2Developing inflorescences (1-1.5 cm)16.547617.648314.6660
ROORoots from the seedlings (10 cm shoot stage)43.16241.40747.16770
NODDeveloping tillers at six leaf stage, 3rd internode12.1311.627811.06480
CAR5Developing grain, bracts removed (5 DPA)42.334346.816353.930
CAR15Developing grain, bracts removed (15 DPA)8.922019.605949.734030



CDS Structure of MLOC_9550






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369753
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369753CUST_21844_PI427708080NoneNoneNone
MLOC_1331.1NoneAvailableNonecontig_11170 (Mapped)
MLOC_21826.1NoneAvailableNonecontig_1599192 (Mapped)
MLOC_33581.1NoneAvailableNonecontig_238634 (Mapped)
MLOC_41524.1NoneAvailableNonecontig_2592815 (Mapped)
MLOC_49669.1NoneAvailableNonecontig_345900 (Not mapped)
MLOC_52466.1NoneAvailableNonecontig_37547 (Mapped)
MLOC_65133.1NoneAvailableAvailablecontig_49792 (Mapped)
MLOC_71398.1NoneAvailableNonecontig_59756 (Mapped)
MLOC_76501.1NoneAvailableNonecontig_71602 (Not mapped)
MLOC_9550.1NoneAvailableNonecontig_153371 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----