MLOC_945 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.61564 | 11.1117 | 10.3151 | 8.14315 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 415.956 | 400.037 | 418.92 | 313.977 |
| INF1 | Young developing inflorescences (5mm) | 9.74816 | 8.05664 | 6.99815 | 6.8604 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.195 | 12.3831 | 16.3838 | 14.9116 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.32398 | 11.7113 | 27.3732 | 12.3017 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 572.671 | 399.96 | 551.781 | 1181.42 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 56.8376 | 57.174 | 43.8757 | 49.7604 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.04389 | 8.01096 | 7.25631 | 18.0003 |
CDS Structure of MLOC_945
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_945.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g52240.1 |
-2 |
2e-174 |
495 |
243/268 (91%) |
13101.m05463 protein chlorophyll A-B binding protein, putative, expressed |
| TAIR PP10 |
AT2G34420.1 |
-2 |
1e-165 |
472 |
237/267 (89%) |
| Symbols: LHB1B2, LHCB1.5 | photosystem II light harvesting complex gene B1B2 | chr2:14522716-14523513 REVERSE LENGTH=265 |
