MLOC_9393 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.747223.030426.03720
LEAShoots from the seedlings (10 cm shoot stage)11.39596.1004216.93350
INF1Young developing inflorescences (5mm)23.695321.06527.91850
INF2Developing inflorescences (1-1.5 cm)16.501214.987112.38590
ROORoots from the seedlings (10 cm shoot stage)45.835112.802324.11430
NODDeveloping tillers at six leaf stage, 3rd internode10.489721.460915.3890
CAR5Developing grain, bracts removed (5 DPA)19.913120.971825.24980
CAR15Developing grain, bracts removed (15 DPA)2.763063.85424.982470



CDS Structure of MLOC_9393






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250196.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250196.1CUST_18807_PI427708080NoneNoneNone
MLOC_21067.1NoneAvailableNonecontig_159301 (Mapped)
MLOC_25136.1NoneAvailableNonecontig_167309 (Mapped)
MLOC_25589.1NoneAvailableNonecontig_1700802 (Not mapped)
MLOC_27434.1NoneAvailableNonecontig_1831573 (Not mapped)
MLOC_27566.1NoneAvailableAvailablecontig_1843700 (Not mapped)
MLOC_33024.1NoneAvailableNonecontig_2338518 (Not mapped)
MLOC_35679.1NoneAvailableNonecontig_2515418 (Not mapped)
MLOC_46822.1NoneAvailableNonecontig_296243 (Mapped)
MLOC_50983.1NoneAvailableNonecontig_36806 (Mapped)
MLOC_9393.1NoneAvailableNonecontig_1519587 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----