MLOC_9319 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains44.457645.416342.384733.241
LEAShoots from the seedlings (10 cm shoot stage)54.746950.994962.652836.7556
INF1Young developing inflorescences (5mm)75.156595.5975129.1757.7183
INF2Developing inflorescences (1-1.5 cm)123.211113.95116.249101.666
ROORoots from the seedlings (10 cm shoot stage)34.073352.796746.799942.954
NODDeveloping tillers at six leaf stage, 3rd internode48.323276.0059102.237200.432
CAR5Developing grain, bracts removed (5 DPA)60.051366.44161.992746.5595
CAR15Developing grain, bracts removed (15 DPA)30.465827.984134.49251.9821



CDS Structure of MLOC_9319






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_9319.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_9319.1CUST_13470_PI427708083AvailableAvailablecontig_151325 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g01994.1 +3 6e-21 88 40/52 (77%) 13105.m00149 protein rab5-interacting protein like, putative, expressed
TAIR PP10 AT5G59410.1 +3 1e-18 81 38/53 (72%) Rab5-interacting family protein | chr5:23959761-23960730 REVERSE LENGTH=130