MLOC_9317 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.550625 | 4.12559 | 3.80584 | 2.21543 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.19482 | 4.19441 | 2.98857 | 2.9359 |
| INF1 | Young developing inflorescences (5mm) | 5.55932 | 5.95321 | 5.36239 | 3.57634 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.3632 | 10.0009 | 9.48902 | 9.84455 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.291968 | 2.76878 | 2.08891 | 2.00672 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.06075 | 2.75457 | 1.52217 | 6.92004 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.24116 | 6.65327 | 7.56363 | 5.17552 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.18051 | 5.06727 | 6.30323 | 9.71953 |
CDS Structure of MLOC_9317
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_9317.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g16300.1 |
+1 |
1e-25 |
110 |
63/105 (60%) |
13102.m01825 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 |
AT5G28780.1 |
+1 |
4e-12 |
68 |
32/68 (47%) |
PIF1 helicase | chr5:10812907-10814173 REVERSE LENGTH=337 |
