MLOC_9301 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.551012.831481.713542.84082
LEAShoots from the seedlings (10 cm shoot stage)4.4087610.221512.07646.6357
INF1Young developing inflorescences (5mm)2.173042.303223.566981.94886
INF2Developing inflorescences (1-1.5 cm)3.22413.134454.523353.3199
ROORoots from the seedlings (10 cm shoot stage)5.09694.857113.405585.0367
NODDeveloping tillers at six leaf stage, 3rd internode12.587514.79916.805143.3104
CAR5Developing grain, bracts removed (5 DPA)4.371434.632645.007953.74811
CAR15Developing grain, bracts removed (15 DPA)1.156031.661661.506542.89597



CDS Structure of MLOC_9301






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_9301.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_9301.1CUST_11100_PI427708083AvailableAvailablecontig_151111 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g08120.2 +3 2e-24 100 50/67 (75%) 13102.m00935 protein calmodulin binding protein, putative, expressed
TAIR PP10 AT5G57580.1 +3 7e-16 76 40/65 (62%) Calmodulin-binding protein | chr5:23314994-23317683 REVERSE LENGTH=647