MLOC_9250 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.319166.964537.51945.74079
LEAShoots from the seedlings (10 cm shoot stage)24.005629.964425.10115.9328
INF1Young developing inflorescences (5mm)9.8919810.754615.43296.38364
INF2Developing inflorescences (1-1.5 cm)9.7526210.534412.3248.29054
ROORoots from the seedlings (10 cm shoot stage)4.785227.7386110.00986.93185
NODDeveloping tillers at six leaf stage, 3rd internode15.864718.09925.855651.4221
CAR5Developing grain, bracts removed (5 DPA)10.340912.731612.60117.91357
CAR15Developing grain, bracts removed (15 DPA)4.8764.889695.632817.94255



CDS Structure of MLOC_9250






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_9250.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_9250.2CUST_13467_PI427708083AvailableAvailablecontig_150529 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g42980.2 +3 4e-29 117 60/63 (95%) 13112.m04534 protein cysteine synthase, putative, expressed
TAIR PP10 AT3G22460.1 +3 2e-25 105 56/77 (73%) | Symbols: OASA2 | O-acetylserine (thiol) lyase (OAS-TL) isoform A2 | chr3:7963855-7965751 FORWARD LENGTH=305