MLOC_92 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_92_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_92_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.75094 | 4.22468 | 4.05708 | 2.79338 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.60229 | 2.62159 | 3.0481 | 2.04139 |
INF1 | Young developing inflorescences (5mm) | 5.70934 | 6.52402 | 4.30287 | 4.04042 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.087 | 4.63378 | 2.25852 | 3.43229 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.587153 | 1.22752 | 1.4589 | 1.22705 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.02288 | 1.15946 | 1.74589 | 3.69238 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.77265 | 4.15728 | 2.28697 | 2.77937 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.2208 | 0.704819 | 0.607888 | 2.02757 |
CDS Structure of MLOC_92
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_92.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g48510.1 |
+2 |
5e-14 |
71 |
42/55 (76%) |
13105.m05167 protein phenylalanyl-tRNA synthetase beta chain, putative, expressed |
TAIR PP10 |
AT1G72550.2 |
+2 |
1e-12 |
66 |
40/53 (75%) |
tRNA synthetase beta subunit family protein | chr1:27319999-27323908 REVERSE LENGTH=584 |