MLOC_9158 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.540381.215470.7731571.16612
LEAShoots from the seedlings (10 cm shoot stage)0.1009780.456680.4272830.275168
INF1Young developing inflorescences (5mm)1.895361.155931.636981.31235
INF2Developing inflorescences (1-1.5 cm)0.7495321.647420.9863611.27272
ROORoots from the seedlings (10 cm shoot stage)0.6465021.194761.065591.23293
NODDeveloping tillers at six leaf stage, 3rd internode0.08890360.1624910.1066270.438601
CAR5Developing grain, bracts removed (5 DPA)3.885494.066073.992253.81697
CAR15Developing grain, bracts removed (15 DPA)0.1509120.1122560.2191280.362251



CDS Structure of MLOC_9158






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_9158.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_9158.1CUST_11076_PI427708083AvailableAvailablecontig_149593 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g41390.1 -1 6e-67 220 105/145 (72%) 13105.m04391 protein cyclin, putative, expressed
TAIR PP10 AT5G06150.1 -1 1e-47 168 77/145 (53%) | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein | chr5:1859542-1861570 REVERSE LENGTH=445