MLOC_9099 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains30.347413.521217.932417.0338
LEAShoots from the seedlings (10 cm shoot stage)9.61033.088587.551014.87457
INF1Young developing inflorescences (5mm)6.6800416.57712.39919.16256
INF2Developing inflorescences (1-1.5 cm)7.445067.217175.084266.73567
ROORoots from the seedlings (10 cm shoot stage)55.433119.836724.390324.4492
NODDeveloping tillers at six leaf stage, 3rd internode21.750524.148845.782365.033
CAR5Developing grain, bracts removed (5 DPA)5.919995.87926.576685.16582
CAR15Developing grain, bracts removed (15 DPA)0.8606370.6051320.9003071.81114



CDS Structure of MLOC_9099






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_9099.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_9099.1CUST_11067_PI427708083AvailableAvailablecontig_149071 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g46030.1 -2 1e-30 121 114/178 (64%) 13106.m04861 protein DUF640 domain containing protein, putative, expressed
TAIR PP10 AT3G23290.2 -2 5e-19 86 41/46 (89%) | Symbols: LSH4 | Protein of unknown function (DUF640) | chr3:8326958-8328010 FORWARD LENGTH=195