MLOC_8932 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.0177 | 9.88749 | 10.0126 | 9.95604 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.24833 | 11.5482 | 11.9031 | 7.83374 |
| INF1 | Young developing inflorescences (5mm) | 7.48901 | 9.39291 | 11.6414 | 8.11008 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.6673 | 10.7353 | 10.3906 | 12.1669 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 32.3388 | 14.9937 | 17.2642 | 19.5625 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 22.3075 | 30.1182 | 54.1793 | 103.44 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.09337 | 5.01775 | 5.03779 | 4.68107 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.56635 | 2.43062 | 2.63763 | 6.19391 |
CDS Structure of MLOC_8932
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_8932.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g36439.1 |
-1 |
9e-101 |
303 |
141/177 (80%) |
13103.m03982 protein F-box domain containing protein, expressed |
| TAIR PP10 |
AT3G48880.2 |
-1 |
3e-14 |
73 |
67/263 (25%) |
RNI-like superfamily protein | chr3:18127873-18129008 FORWARD LENGTH=309 |
