MLOC_8870 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.78528 | 1.85021 | 1.59013 | 1.71301 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.85748 | 12.2587 | 12.2772 | 8.71813 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.025419 | 0.0214619 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.48528 | 1.14969 | 1.05046 | 1.20773 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.809779 | 2.58526 | 0.434492 | 5.13401 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.87034 | 3.37017 | 3.18282 | 2.88461 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.106866 | 0.127157 | 0.126347 | 0.322254 |
CDS Structure of MLOC_8870
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_8870.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g15170.1 |
-3 |
0.0 |
744 |
355/435 (82%) |
13106.m01678 protein 3-ketoacyl-CoA synthase, putative, expressed |
| TAIR PP10 |
AT1G68530.1 |
-3 |
0.0 |
555 |
278/449 (62%) |
| Symbols: CUT1, POP1, CER6, G2, KCS6 | 3-ketoacyl-CoA synthase 6 | chr1:25712881-25714733 REVERSE LENGTH=497 |
