MLOC_882 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.38704 | 4.42514 | 5.31421 | 4.72887 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.94271 | 3.9101 | 2.73479 | 4.34702 |
| INF1 | Young developing inflorescences (5mm) | 5.39058 | 7.13707 | 10.1616 | 6.88639 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.88768 | 9.65317 | 5.64889 | 9.01095 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.827 | 9.77589 | 8.91888 | 12.0238 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.05647 | 7.20608 | 3.27255 | 21.1196 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 42.542 | 55.1894 | 47.2931 | 53.7703 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 18.4603 | 17.5504 | 18.894 | 47.3105 |
CDS Structure of MLOC_882
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_882.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g02600.1 |
-1 |
1e-60 |
197 |
90/98 (92%) |
13106.m00192 protein DAG protein, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT1G32580.1 |
-1 |
2e-58 |
191 |
86/111 (77%) |
plastid developmental protein DAG, putative | chr1:11784108-11785430 FORWARD LENGTH=229 |
