MLOC_878 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.252250.9140221.32930
LEAShoots from the seedlings (10 cm shoot stage)10.86275.688763.102110
INF1Young developing inflorescences (5mm)2.381721.291282.581640
INF2Developing inflorescences (1-1.5 cm)01.015660.4548880
ROORoots from the seedlings (10 cm shoot stage)00.48812400
NODDeveloping tillers at six leaf stage, 3rd internode1.765092.055913.314410
CAR5Developing grain, bracts removed (5 DPA)0.8415060.3843310.4264720
CAR15Developing grain, bracts removed (15 DPA)000.5465760



CDS Structure of MLOC_878






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK355166
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355166CUST_23768_PI427708080NoneNoneNone
MLOC_11387.1NoneAvailableNonecontig_1560959 (Mapped)
MLOC_16736.1NoneAvailableNonecontig_1574320 (Mapped)
MLOC_44731.1NoneAvailableNonecontig_275264 (Mapped)
MLOC_64060.1NoneAvailableAvailablecontig_48323 (Mapped)
MLOC_878.1NoneAvailableNonecontig_1071560 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----