MLOC_8747 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.872821.901811.100692.54878
LEAShoots from the seedlings (10 cm shoot stage)0.8737740.7637930.2336680.635814
INF1Young developing inflorescences (5mm)4.682483.523435.84924.4136
INF2Developing inflorescences (1-1.5 cm)2.595092.993542.482473.83236
ROORoots from the seedlings (10 cm shoot stage)1.629091.831933.823722.5052
NODDeveloping tillers at six leaf stage, 3rd internode0.5998520.3179870.5125221.08732
CAR5Developing grain, bracts removed (5 DPA)1.093521.242961.886551.99308
CAR15Developing grain, bracts removed (15 DPA)0.3192190.478290.6261331.97855



CDS Structure of MLOC_8747






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_8747.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_8747.1CUST_13462_PI427708083AvailableAvailablecontig_145935 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g52490.1 +2 6e-40 110 51/61 (84%) 13101.m05492 protein 40S ribosomal protein S24, putative, expressed
TAIR PP10 AT3G04920.1 +2 4e-36 106 48/60 (80%) Ribosomal protein S24e family protein | chr3:1360989-1362065 FORWARD LENGTH=133