MLOC_8741 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.4230718.890116.275216.5553
LEAShoots from the seedlings (10 cm shoot stage)19.781419.618314.75715.5328
INF1Young developing inflorescences (5mm)20.015821.738319.929217.8394
INF2Developing inflorescences (1-1.5 cm)31.753726.739427.524432.3749
ROORoots from the seedlings (10 cm shoot stage)17.380817.514715.9521.1576
NODDeveloping tillers at six leaf stage, 3rd internode15.399814.63110.871847.5457
CAR5Developing grain, bracts removed (5 DPA)17.631215.966715.980616.8421
CAR15Developing grain, bracts removed (15 DPA)7.905397.158278.1151518.0743



CDS Structure of MLOC_8741






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_8741.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_8741.1CUST_16977_PI427708080AvailableAvailablecontig_14587 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g37520.1 -2 0.0 1164 592/645 (92%) 13111.m03672 protein BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed
TAIR PP10 AT4G02680.1 -2 0.0 741 390/649 (60%) | Symbols: EOL1 | ETO1-like 1 | chr4:1181202-1184328 REVERSE LENGTH=888