MLOC_87 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 25.3694 | 24.3908 | 24.5445 | 25.481 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 43.7925 | 28.725 | 24.86 | 26.1189 |
| INF1 | Young developing inflorescences (5mm) | 12.28 | 9.94691 | 9.74959 | 9.82289 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.55231 | 6.027 | 7.43181 | 8.19666 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 31.4047 | 24.2446 | 25.3505 | 28.3051 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 14.3305 | 14.9686 | 14.8882 | 38.6886 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.30069 | 7.13442 | 5.55973 | 6.82279 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.55582 | 4.94992 | 4.20309 | 14.1473 |
CDS Structure of MLOC_87
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_87.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g48030.1 |
+3 |
0.0 |
537 |
269/300 (90%) |
13106.m05104 protein peroxidase precursor, putative, expressed |
| TAIR PP10 |
AT2G18980.1 |
+3 |
9e-111 |
340 |
168/299 (56%) |
Peroxidase superfamily protein | chr2:8233419-8235294 REVERSE LENGTH=323 |
