MLOC_8647 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.214111.377713.751611.6539
LEAShoots from the seedlings (10 cm shoot stage)28.622835.806436.132527.9524
INF1Young developing inflorescences (5mm)18.663722.532231.490717.6043
INF2Developing inflorescences (1-1.5 cm)32.532223.717924.4927.4292
ROORoots from the seedlings (10 cm shoot stage)3.3514410.13299.051110.4045
NODDeveloping tillers at six leaf stage, 3rd internode20.86631.755932.813109.969
CAR5Developing grain, bracts removed (5 DPA)21.825424.390224.046120.0721
CAR15Developing grain, bracts removed (15 DPA)7.528836.280518.1567414.8137



CDS Structure of MLOC_8647






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_8647.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_8647.2CUST_11002_PI427708083AvailableAvailablecontig_145068 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g12450.1 -2 7e-18 85 41/54 (76%) 13103.m01426 protein nucleoporin, putative, expressed
TAIR PP10None-----