MLOC_8531 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.68955 | 6.81968 | 6.6497 | 6.58531 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.62377 | 6.07156 | 6.15966 | 5.53438 |
| INF1 | Young developing inflorescences (5mm) | 14.2825 | 14.2785 | 16.7657 | 12.0612 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.0249 | 17.0721 | 19.6186 | 18.4231 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.23994 | 9.12146 | 8.42885 | 10.0406 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.81446 | 7.92923 | 9.61252 | 25.96 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.60536 | 8.69329 | 8.16283 | 8.16586 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.19738 | 5.20541 | 4.877 | 11.6096 |
CDS Structure of MLOC_8531
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_8531.14
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g06120.1 |
+1 |
2e-54 |
193 |
105/141 (74%) |
13106.m00622 protein expressed protein |
| TAIR PP10 |
AT1G78420.2 |
+1 |
2e-33 |
132 |
62/100 (62%) |
RING/U-box superfamily protein | chr1:29505278-29507272 FORWARD LENGTH=401 |
